RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 CFAP52Q8N1V2 620 aa20.88■□□□□ 0.93
CLN6-207ENST00000566347 ZCCHC9Q8N567 271 aaKnown RBP20.88■□□□□ 0.93
CLN6-207ENST00000566347 WDTC1Q8N5D0 677 aa20.88■□□□□ 0.93
CLN6-207ENST00000566347 MYEOVQ96EZ4 313 aa20.88■□□□□ 0.93
CLN6-207ENST00000566347 SLC2A13Q96QE2 648 aa20.88■□□□□ 0.93
CLN6-207ENST00000566347 CPXM1Q96SM3 734 aa20.88■□□□□ 0.93
CLN6-207ENST00000566347 MIR1-1HGQ9H1L0 117 aa20.88■□□□□ 0.93
CLN6-207ENST00000566347 NDST4Q9H3R1 872 aa20.88■□□□□ 0.93
CLN6-207ENST00000566347 FAM204AQ9H8W3 233 aa20.88■□□□□ 0.93
CLN6-207ENST00000566347 SIX2Q9NPC8 291 aa20.88■□□□□ 0.93
CLN6-207ENST00000566347 KIAA1522Q9P206 1035 aaPredicted RBP20.88■□□□□ 0.93
CLN6-207ENST00000566347 XPO7Q9UIA9 1087 aaKnown RBP20.88■□□□□ 0.93
CLN6-207ENST00000566347 DNAJC12Q9UKB3 198 aa20.88■□□□□ 0.93
CLN6-207ENST00000566347 CEP83Q9Y592 693 aa20.88■□□□□ 0.93
CLN6-207ENST00000566347 KCNU1A8MYU2 1149 aa20.87■□□□□ 0.93
CLN6-207ENST00000566347 F5H5T6 163 aa20.87■□□□□ 0.93
CLN6-207ENST00000566347 H0Y626 953 aa20.87■□□□□ 0.93
CLN6-207ENST00000566347 KRT9P35527 623 aa20.87■□□□□ 0.93
CLN6-207ENST00000566347 MTA1Q13330 715 aa20.87■□□□□ 0.93
CLN6-207ENST00000566347 EIF4EBP2Q13542 120 aaPredicted RBP20.87■□□□□ 0.93
CLN6-207ENST00000566347 TAF5Q15542 800 aa20.87■□□□□ 0.93
CLN6-207ENST00000566347 DPCR1Q3MIW9 517 aa20.87■□□□□ 0.93
CLN6-207ENST00000566347 VWA3BQ502W6 1294 aa20.87■□□□□ 0.93
CLN6-207ENST00000566347 PITRM1Q5JRX3 1037 aa20.87■□□□□ 0.93
CLN6-207ENST00000566347 RAP1GAP2Q684P5 730 aa20.87■□□□□ 0.93
CLN6-207ENST00000566347 ZNF776Q68DI1 518 aaPredicted RBP20.87■□□□□ 0.93
CLN6-207ENST00000566347 C11orf57Q6ZUT1 292 aaPredicted RBP20.87■□□□□ 0.93
CLN6-207ENST00000566347 PASD1Q8IV76 773 aa20.87■□□□□ 0.93
CLN6-207ENST00000566347 TUBGCP2Q9BSJ2 902 aa20.87■□□□□ 0.93
CLN6-207ENST00000566347 NUP62CLQ9H1M0 184 aa20.87■□□□□ 0.93
CLN6-207ENST00000566347 INTS6Q9UL03 887 aaKnown RBP20.87■□□□□ 0.93
CLN6-207ENST00000566347 SCML1Q9UN30 329 aa20.87■□□□□ 0.93
CLN6-207ENST00000566347 KMT2BQ9UMN6 2715 aaPredicted RBP20.86■□□□□ 0.93
CLN6-207ENST00000566347 BCAT2O15382 392 aaPredicted RBP20.86■□□□□ 0.93
CLN6-207ENST00000566347 SRPRAP08240 638 aaKnown RBP20.86■□□□□ 0.93
CLN6-207ENST00000566347 ABCB4P21439 1286 aa20.86■□□□□ 0.93
CLN6-207ENST00000566347 CCR1P32246 355 aa20.86■□□□□ 0.93
CLN6-207ENST00000566347 BPIFB4P59827 614 aa20.86■□□□□ 0.93
CLN6-207ENST00000566347 SFSWAPQ12872 951 aaKnown RBP20.86■□□□□ 0.93
CLN6-207ENST00000566347 FOXC1Q12948 553 aa20.86■□□□□ 0.93
CLN6-207ENST00000566347 GRIK2Q13002 908 aa20.86■□□□□ 0.93
CLN6-207ENST00000566347 HNRNPDQ14103 355 aaKnown RBP20.86■□□□□ 0.93
CLN6-207ENST00000566347 ARID5BQ14865 1188 aa20.86■□□□□ 0.93
CLN6-207ENST00000566347 ST3GAL2Q16842 350 aa20.86■□□□□ 0.93
CLN6-207ENST00000566347 HNRNPA1L2Q32P51 320 aaKnown RBP20.86■□□□□ 0.93
CLN6-207ENST00000566347 FSCBQ5H9T9 825 aa20.86■□□□□ 0.93
CLN6-207ENST00000566347 TTC39BQ5VTQ0 682 aaPredicted RBP20.86■□□□□ 0.93
CLN6-207ENST00000566347 DEFB106AQ8N104 65 aa20.86■□□□□ 0.93
CLN6-207ENST00000566347 C1orf131Q8NDD1 294 aaKnown RBP20.86■□□□□ 0.93
CLN6-207ENST00000566347 OR2I1PQ8NGU4 316 aa20.86■□□□□ 0.93
CLN6-207ENST00000566347 MYO19Q96H55 970 aa20.86■□□□□ 0.93
CLN6-207ENST00000566347 BTBD1Q9H0C5 482 aa20.86■□□□□ 0.93
CLN6-207ENST00000566347 RSPH9Q9H1X1 276 aaPredicted RBP20.86■□□□□ 0.93
CLN6-207ENST00000566347 DDIT4Q9NX09 232 aa20.86■□□□□ 0.93
CLN6-207ENST00000566347 FOXN3O00409 490 aaPredicted RBP20.85■□□□□ 0.93
CLN6-207ENST00000566347 RNASEH1O60930 286 aaKnown RBP20.85■□□□□ 0.93
CLN6-207ENST00000566347 GJB3O75712 270 aa20.85■□□□□ 0.93
CLN6-207ENST00000566347 ACSL1P33121 698 aa20.85■□□□□ 0.93
CLN6-207ENST00000566347 CLCN1P35523 988 aa20.85■□□□□ 0.93
CLN6-207ENST00000566347 PITX1P78337 314 aaPredicted RBP20.85■□□□□ 0.93
CLN6-207ENST00000566347 SLC12A1Q13621 1099 aa20.85■□□□□ 0.93
CLN6-207ENST00000566347 NUMA1Q14980 2115 aa20.85■□□□□ 0.93
CLN6-207ENST00000566347 CT47A1Q5JQC4 288 aaPredicted RBP20.85■□□□□ 0.93
CLN6-207ENST00000566347 RABGAP1LQ5R372 815 aa20.85■□□□□ 0.93
CLN6-207ENST00000566347 OR6B2Q6IFH4 312 aa20.85■□□□□ 0.93
CLN6-207ENST00000566347 IL27RAQ6UWB1 636 aa20.85■□□□□ 0.93
CLN6-207ENST00000566347 SLC47A2Q86VL8 602 aa20.85■□□□□ 0.93
CLN6-207ENST00000566347 FAM71AQ8IYT1 594 aa20.85■□□□□ 0.93
CLN6-207ENST00000566347 RNF34Q969K3 372 aa20.85■□□□□ 0.93
CLN6-207ENST00000566347 MRGPRX3Q96LB0 322 aa20.85■□□□□ 0.93
CLN6-207ENST00000566347 SYNCQ9H7C4 482 aa20.85■□□□□ 0.93
CLN6-207ENST00000566347 SGK2Q9HBY8 427 aa20.85■□□□□ 0.93
CLN6-207ENST00000566347 EIF2B4Q9UI10 523 aaKnown RBP20.85■□□□□ 0.93
CLN6-207ENST00000566347 AJAP1Q9UKB5 411 aaPredicted RBP20.85■□□□□ 0.93
CLN6-207ENST00000566347 ERVW-1Q9UQF0 538 aa20.85■□□□□ 0.93
CLN6-207ENST00000566347 NCKAP1Q9Y2A7 1128 aa20.85■□□□□ 0.93
CLN6-207ENST00000566347 TARSL2A2RTX5 802 aaKnown RBP20.84■□□□□ 0.93
CLN6-207ENST00000566347 SEMA4FO95754 770 aa20.84■□□□□ 0.93
CLN6-207ENST00000566347 CD59P13987 128 aa20.84■□□□□ 0.93
CLN6-207ENST00000566347 ECT2LQ008S8 904 aa20.84■□□□□ 0.93
CLN6-207ENST00000566347 MIIPQ5JXC2 388 aa20.84■□□□□ 0.93
CLN6-207ENST00000566347 RNF219Q5W0B1 726 aaPredicted RBP20.84■□□□□ 0.93
CLN6-207ENST00000566347 OLFML1Q6UWY5 402 aa20.84■□□□□ 0.93
CLN6-207ENST00000566347 MMS22LQ6ZRQ5 1243 aa20.84■□□□□ 0.93
CLN6-207ENST00000566347 FAM183BPQ6ZVS7 135 aa20.84■□□□□ 0.93
CLN6-207ENST00000566347 USP30Q70CQ3 517 aa20.84■□□□□ 0.93
CLN6-207ENST00000566347 ZDHHC17Q8IUH5 632 aa20.84■□□□□ 0.93
CLN6-207ENST00000566347 SNX19Q92543 992 aa20.84■□□□□ 0.93
CLN6-207ENST00000566347 PRMT1Q99873 361 aaKnown RBP20.84■□□□□ 0.93
CLN6-207ENST00000566347 C6orf106Q9H6K1 298 aaPredicted RBP20.84■□□□□ 0.93
CLN6-207ENST00000566347 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.84■□□□□ 0.93
CLN6-207ENST00000566347 ITIH6Q6UXX5 1313 aa20.83■□□□□ 0.93
CLN6-207ENST00000566347 SYNJ2BP-COX16A0A087WUM0 186 aa20.83■□□□□ 0.93
CLN6-207ENST00000566347 EDDM13A0A1B0GTR0 161 aa20.83■□□□□ 0.93
CLN6-207ENST00000566347 SIN3BO75182 1162 aa20.83■□□□□ 0.93
CLN6-207ENST00000566347 DAB1O75553 588 aa20.83■□□□□ 0.93
CLN6-207ENST00000566347 GRAP2O75791 330 aa20.83■□□□□ 0.93
CLN6-207ENST00000566347 ERBB2P04626 1255 aa20.83■□□□□ 0.93
CLN6-207ENST00000566347 OXCT1P55809 520 aa20.83■□□□□ 0.93
CLN6-207ENST00000566347 SIM1P81133 766 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms