RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 HMGB4Q8WW32 186 aa3.93□□□□□ -1.78
PALB2-204ENST00000566069 ASB12Q8WXK4 309 aa3.93□□□□□ -1.78
PALB2-204ENST00000566069 CCT6BQ92526 530 aa3.93□□□□□ -1.78
PALB2-204ENST00000566069 P2RY11Q96G91 374 aa3.93□□□□□ -1.78
PALB2-204ENST00000566069 ZNF845Q96IR2 970 aaPredicted RBP3.93□□□□□ -1.78
PALB2-204ENST00000566069 SENP7Q9BQF6 1050 aa3.93□□□□□ -1.78
PALB2-204ENST00000566069 PAGR1Q9BTK6 254 aa3.93□□□□□ -1.78
PALB2-204ENST00000566069 DDX23Q9BUQ8 820 aaKnown RBP3.93□□□□□ -1.78
PALB2-204ENST00000566069 ELOVL1Q9BW60 279 aa3.93□□□□□ -1.78
PALB2-204ENST00000566069 NUAK2Q9H093 628 aa3.93□□□□□ -1.78
PALB2-204ENST00000566069 MYLK2Q9H1R3 596 aa3.93□□□□□ -1.78
PALB2-204ENST00000566069 CCDC134Q9H6E4 229 aa3.93□□□□□ -1.78
PALB2-204ENST00000566069 MLXIPQ9HAP2 919 aa3.93□□□□□ -1.78
PALB2-204ENST00000566069 ZNF112Q9UJU3 913 aa3.93□□□□□ -1.78
PALB2-204ENST00000566069 DAPP1Q9UN19 280 aa3.93□□□□□ -1.78
PALB2-204ENST00000566069 PROCRQ9UNN8 238 aa3.93□□□□□ -1.78
PALB2-204ENST00000566069 RIPOR2Q9Y4F9 1068 aa3.93□□□□□ -1.78
PALB2-204ENST00000566069 EVPLQ92817 2033 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 MBD3L5A6NJ08 208 aaPredicted RBP3.92□□□□□ -1.78
PALB2-204ENST00000566069 SLC38A8A6NNN8 435 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 M0QYT0 321 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 IPO5O00410 1097 aaKnown RBP3.92□□□□□ -1.78
PALB2-204ENST00000566069 PRYO14603 147 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 CST5P28325 142 aaPredicted RBP3.92□□□□□ -1.78
PALB2-204ENST00000566069 TACR3P29371 465 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 HOXD12P35452 270 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 VPS41P49754 854 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 AGTR2P50052 363 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 RBM6P78332 1123 aaKnown RBP3.92□□□□□ -1.78
PALB2-204ENST00000566069 GAB1Q13480 694 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 SEMA3AQ14563 771 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 TBRG1Q3YBR2 411 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 GLE1Q53GS7 698 aaKnown RBP3.92□□□□□ -1.78
PALB2-204ENST00000566069 ZNF569Q5MCW4 686 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 JMJD6Q6NYC1 403 aaPredicted RBP3.92□□□□□ -1.78
PALB2-204ENST00000566069 RFX8Q6ZV50 586 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 C16orf71Q8IYS4 520 aaPredicted RBP3.92□□□□□ -1.78
PALB2-204ENST00000566069 GALNT15Q8N3T1 639 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.92□□□□□ -1.78
PALB2-204ENST00000566069 CPT1BQ92523 772 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 TRMT61AQ96FX7 289 aaKnown RBP3.92□□□□□ -1.78
PALB2-204ENST00000566069 ISCA1Q9BUE6 129 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 EFHD1Q9BUP0 239 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 MECRQ9BV79 373 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 SORBS1Q9BX66 1292 aaKnown RBP3.92□□□□□ -1.78
PALB2-204ENST00000566069 HIPK2Q9H2X6 1198 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 ELAC1Q9H777 363 aaKnown RBP3.92□□□□□ -1.78
PALB2-204ENST00000566069 LIN7CQ9NUP9 197 aaKnown RBP3.92□□□□□ -1.78
PALB2-204ENST00000566069 ARL8BQ9NVJ2 186 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 ASNSD1Q9NWL6 643 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 NDUFAF4Q9P032 175 aa3.92□□□□□ -1.78
PALB2-204ENST00000566069 MORC2Q9Y6X9 1032 aaPredicted RBP3.92□□□□□ -1.78
PALB2-204ENST00000566069 FAM90A8PA6NJQ4 464 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 ERVV-2B6SEH9 535 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 PRSS44E7EML9 344 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 TOMM40O96008 361 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 ALDOAP04075 364 aaKnown RBP3.91□□□□□ -1.78
PALB2-204ENST00000566069 CYP3A4P08684 503 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 FAM90A13PP0C7W8 464 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 FAM90A24PP0C7X0 464 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 KRT10P13645 584 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 IGFBP2P18065 325 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 GRK5P34947 590 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 STAT6P42226 847 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 HALP42357 657 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 FAM3BP58499 235 aaPredicted RBP3.91□□□□□ -1.78
PALB2-204ENST00000566069 TAS2R50P59544 299 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 RPL15P61313 204 aaKnown RBP3.91□□□□□ -1.78
PALB2-204ENST00000566069 SRSF1Q07955 248 aaKnown RBP eCLIP3.91□□□□□ -1.78
PALB2-204ENST00000566069 DMWDQ09019 674 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 DHX8Q14562 1220 aaKnown RBP3.91□□□□□ -1.78
PALB2-204ENST00000566069 ZNF268Q14587 947 aaPredicted RBP3.91□□□□□ -1.78
PALB2-204ENST00000566069 POSTNQ15063 836 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 RPS6KA2Q15349 733 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 SEC23BQ15437 767 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 TIGD6Q17RP2 521 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 SMC5Q8IY18 1101 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 ADPRHL1Q8NDY3 354 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 SRFBP1Q8NEF9 429 aaKnown RBP3.91□□□□□ -1.78
PALB2-204ENST00000566069 OSR1Q8TAX0 266 aaPredicted RBP3.91□□□□□ -1.78
PALB2-204ENST00000566069 THAP4Q8WY91 577 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 C3orf49Q96BT1 292 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 TRIM2Q9C040 744 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 BRD8Q9H0E9 1235 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 VPS33BQ9H267 617 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 PPCSQ9HAB8 311 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 SAYSD1Q9NPB0 183 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 SRP68Q9UHB9 627 aaKnown RBP3.91□□□□□ -1.78
PALB2-204ENST00000566069 RAB21Q9UL25 225 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 TRPC5Q9UL62 973 aaPredicted RBP3.91□□□□□ -1.78
PALB2-204ENST00000566069 HEMK1Q9Y5R4 338 aaPredicted RBP3.91□□□□□ -1.78
PALB2-204ENST00000566069 SPATA31A5Q5VU36 1347 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 SPATA31A7Q8IWB4 1347 aa3.91□□□□□ -1.78
PALB2-204ENST00000566069 CYP3A7-CYP3A51PA0A087WV96 503 aa3.9□□□□□ -1.79
PALB2-204ENST00000566069 TBC1D3DA0A087WVF3 549 aa3.9□□□□□ -1.79
PALB2-204ENST00000566069 TBC1D3IA0A087WXS9 549 aa3.9□□□□□ -1.79
PALB2-204ENST00000566069 TBC1D3EA0A087X179 549 aa3.9□□□□□ -1.79
PALB2-204ENST00000566069 TBC1D3KA0A087X1G2 549 aa3.9□□□□□ -1.79
PALB2-204ENST00000566069 TBC1D3BA6NDS4 549 aa3.9□□□□□ -1.79
PALB2-204ENST00000566069 TBC1D3FA6NER0 549 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms