RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 BCL2L1Q07817 233 aa13.89□□□□□ -0.19
CX3CL1-204ENST00000565912 PWP2Q15269 919 aaKnown RBP13.89□□□□□ -0.19
CX3CL1-204ENST00000565912 SLC39A12Q504Y0 691 aa13.89□□□□□ -0.19
CX3CL1-204ENST00000565912 SLC27A1Q6PCB7 646 aa13.89□□□□□ -0.19
CX3CL1-204ENST00000565912 SCUBE3Q8IX30 993 aa13.89□□□□□ -0.19
CX3CL1-204ENST00000565912 CLYBLQ8N0X4 340 aa13.89□□□□□ -0.19
CX3CL1-204ENST00000565912 HNRNPLLQ8WVV9 542 aaKnown RBP13.89□□□□□ -0.19
CX3CL1-204ENST00000565912 NDUFAF1Q9Y375 327 aa13.89□□□□□ -0.19
CX3CL1-204ENST00000565912 CYP2A6P11509 494 aaPredicted RBP13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 GPR15P49685 360 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 XRCC4Q13426 336 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 HOMEZQ8IX15 550 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 MCOLN2Q8IZK6 566 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 TRAPPC12Q8WVT3 735 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 KLHL25Q9H0H3 589 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 NMRAL1Q9HBL8 299 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 RPRD1BQ9NQG5 326 aaKnown RBP13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 CCDC154A6NI56 674 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 AMHP03971 560 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 SLC44A4Q53GD3 710 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 IZUMO2Q6UXV1 221 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 RHBGQ9H310 441 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 ZFYVE1Q9HBF4 777 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 PCDH9Q9HC56 1237 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 NAALADL1Q9UQQ1 740 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 SIK3Q9Y2K2 1263 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 A0A0A6YYK5 440 aaPredicted RBP13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 INPP4BO15327 924 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 XYLBO75191 536 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 VAV1P15498 845 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 FMO4P31512 558 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 SCTRP47872 440 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 PSMC6P62333 389 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 CYP20A1Q6UW02 462 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 DSG4Q86SJ6 1040 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 OR56A4Q8NGH8 313 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 ZNF606Q8WXB4 792 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 SLC5A5Q92911 643 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 SKA1Q96BD8 255 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 TBL1YQ9BQ87 522 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 KBTBD4Q9NVX7 518 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 CROTQ9UKG9 612 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 BTN3A1O00481 513 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 PGAM1P18669 254 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 EID3Q8N140 333 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 MTFMTQ96DP5 389 aaKnown RBP13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 IL25Q9H293 177 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 XPNPEP3Q9NQH7 507 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 RRN3Q9NYV6 651 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 LIMD1Q9UGP4 676 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 SPATA2Q9UM82 520 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 TRIM43BA6NCK2 446 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 MOXD2PA6NHM9 499 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 ZW10O43264 779 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 OR6A2O95222 327 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 JAK1P23458 1154 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 GP5P40197 560 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 DEFB132Q7Z7B7 95 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 DEFB106AQ8N104 65 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 RNASE11Q8TAA1 199 aaKnown RBP13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 SLC2A14Q8TDB8 520 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 ANKRD7Q92527 254 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 REPS1Q96D71 796 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 APBA2Q99767 749 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 RTFDC1Q9BY42 306 aaPredicted RBP13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 CXorf56Q9H5V9 222 aa13.88□□□□□ -0.19
CX3CL1-204ENST00000565912 YBX3P16989 372 aaKnown RBP eCLIP13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 CCDC153Q494R4 210 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 ZNF618Q5T7W0 954 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 REPS2Q8NFH8 660 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 MOSPD2Q8NHP6 518 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 PRKD2Q9BZL6 878 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 USP20Q9Y2K6 914 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 NCOA3Q9Y6Q9 1424 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 CHURC1-FNTBB4DL54 471 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 RPN2P04844 631 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 CRABP2P29373 138 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 NPY2RP49146 381 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 FASTKQ14296 549 aaKnown RBP13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 SETMARQ53H47 684 aaPredicted RBP13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 TPGS1Q6ZTW0 290 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 FAM126BQ8IXS8 530 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 DCLK3Q9C098 648 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 LRRC14BA6NHZ5 514 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 KCNK1O00180 336 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 CLPTM1O96005 669 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 SLC30A10Q6XR72 485 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 TLK2Q86UE8 772 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 GINS4Q9BRT9 223 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 RRAGCQ9HB90 399 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 ADPRHL2Q9NX46 363 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 MRPL39Q9NYK5 338 aaKnown RBP13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 LACTBL1A8MY62 500 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 HS6ST1O60243 411 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 RTN3O95197 1032 aaPredicted RBP13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 PRLRP16471 622 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 CDH8P55286 799 aa13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 ZNF268Q14587 947 aaPredicted RBP13.87□□□□□ -0.19
CX3CL1-204ENST00000565912 TCHHL1Q5QJ38 904 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms