RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 FNBP1LQ5T0N5 605 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 BTBD8Q5XKL5 378 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 NECAB2Q7Z6G3 386 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 MIB1Q86YT6 1006 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 LRRC43Q8N309 656 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.42□□□□□ -1.38
CHD9-217ENST00000565832 NPWQ8N729 165 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 DEPDC1BQ8WUY9 529 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 CPT1BQ92523 772 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 LRRC45Q96CN5 670 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 ZNF689Q96CS4 500 aaPredicted RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 RUNDC3BQ96NL0 473 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 RBM15Q96T37 977 aaKnown RBP eCLIP6.42□□□□□ -1.386e-6■■■□□ 15.8
CHD9-217ENST00000565832 SH3GL2Q99962 352 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 ZNF670Q9BS34 389 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 PABPC3Q9H361 631 aaKnown RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 CDC42EP4Q9H3Q1 356 aaKnown RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 TOR4AQ9NXH8 423 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 TPX2Q9ULW0 747 aaKnown RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 GREB1Q4ZG55 1949 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 TRIOO75962 3097 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 EEF2KO00418 725 aaKnown RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 DNALI1O14645 258 aaPredicted RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 RIPK2O43353 540 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 MFSD11O43934 449 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 LRIG2O94898 1065 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 METTL18O95568 372 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 EFEMP2O95967 443 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 HMBSP08397 361 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 RARGP13631 454 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 SYN1P17600 705 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 DESP17661 470 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 ERCC2P18074 760 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 ATF6P18850 670 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 BASP1P80723 227 aaKnown RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 EIF4EBP2Q13542 120 aaPredicted RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 BTG3Q14201 252 aaPredicted RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 NFE2Q16621 373 aaPredicted RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 EFHC2Q5JST6 749 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 ARTNQ5T4W7 220 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 RNASEH2BQ5TBB1 312 aaKnown RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 ZNF280DQ6N043 979 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 MFSD5Q6N075 450 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 KIAA1841Q6NSI8 718 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 DENND5BQ6ZUT9 1274 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 RFX8Q6ZV50 586 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 SYDE1Q6ZW31 735 aaPredicted RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 SPRED2Q7Z698 418 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 C14orf80Q86SX3 495 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 ZDHHC1Q8WTX9 485 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.42□□□□□ -1.382e-7■■■■■ 50.8
CHD9-217ENST00000565832 BADQ92934 168 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 CELF6Q96J87 481 aaKnown RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 MRPL9Q9BYD2 267 aaKnown RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 CCSER2Q9H7U1 834 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 ABCC13Q9NSE7 274 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 NDFIP2Q9NV92 336 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 PIH1D1Q9NWS0 290 aaKnown RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 MTRF1LQ9UGC7 380 aaKnown RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 DCTN4Q9UJW0 460 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 MYO16Q9Y6X6 1858 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 ARHGEF37A1IGU5 675 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 KCNK1O00180 336 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 PAGE1O75459 146 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 TMEM63AO94886 807 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 IGLV3-25P01717 112 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 VAV1P15498 845 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 PAX3P23760 479 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 YWHAQP27348 245 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 EPHB2P29323 1055 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 ARL4AP40617 200 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 GRIA1P42261 906 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 AP1B1Q10567 949 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 EFEMP1Q12805 493 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 SEMA3BQ13214 749 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 GPS2Q13227 327 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 DPYSQ14117 519 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 PSMD5Q16401 504 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 LONRF1Q17RB8 773 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 USP41Q3LFD5 358 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 RWDD4Q6NW29 188 aaKnown RBP6.41□□□□□ -1.38
CHD9-217ENST00000565832 VSTM1Q6UX27 236 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 TRIM67Q6ZTA4 783 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 ANKS3Q6ZW76 656 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 MON1AQ86VX9 555 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 IGDCC3Q8IVU1 814 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 CCDC13Q8IYE1 715 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 ZNF295-AS1Q8N0V1 137 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 AGGF1Q8N302 714 aaeCLIP6.41□□□□□ -1.385e-8■■■■□ 20.3
CHD9-217ENST00000565832 CCNYQ8ND76 341 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 EPS8L3Q8TE67 593 aaKnown RBP6.41□□□□□ -1.38
CHD9-217ENST00000565832 IRGQQ8WZA9 623 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 PRCCQ92733 491 aaPredicted RBP6.41□□□□□ -1.38
CHD9-217ENST00000565832 PGAP3Q96FM1 320 aaPredicted RBP6.41□□□□□ -1.38
CHD9-217ENST00000565832 FUBP3Q96I24 572 aaKnown RBP eCLIP6.41□□□□□ -1.38
CHD9-217ENST00000565832 C8orf48Q96LL4 319 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 RUFY1Q96T51 708 aa6.41□□□□□ -1.38
CHD9-217ENST00000565832 WDR83Q9BRX9 315 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms