RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 C4orf46Q504U0 113 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 BEND5Q7L4P6 421 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 TBC1D20Q96BZ9 403 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 Q96MF0 132 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 SHOC2Q9UQ13 582 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 HS3ST4Q9Y661 456 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 MYADML2A6NDP7 307 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 J3KTA2 159 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 M0QYT0 321 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 TRIM24O15164 1050 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 PDE8BO95263 885 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 PSMC4P43686 418 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 HMGN5P82970 282 aaKnown RBP4.67□□□□□ -1.66
LINC00561-201ENST00000565815 GPS1Q13098 491 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 FBLN7Q53RD9 439 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 GRHL2Q6ISB3 625 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 CLEC9AQ6UXN8 241 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 RRAGAQ7L523 313 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 FASTKD5Q7L8L6 764 aaKnown RBP4.67□□□□□ -1.66
LINC00561-201ENST00000565815 ZNF804AQ7Z570 1209 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 CXorf38Q8TB03 319 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 STT3BQ8TCJ2 826 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 FAM136AQ96C01 138 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 SELENOOQ9BVL4 669 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 C1QTNF1Q9BXJ1 281 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 AMBRA1Q9C0C7 1298 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 XPNPEP3Q9NQH7 507 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 TMOD2Q9NZR1 351 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 RIMKLBQ9ULI2 386 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 REXO2Q9Y3B8 237 aaKnown RBP4.67□□□□□ -1.66
LINC00561-201ENST00000565815 COL2A1P02458 1487 aaPredicted RBP4.67□□□□□ -1.66
LINC00561-201ENST00000565815 RNASET2O00584 256 aaKnown RBP4.66□□□□□ -1.66
LINC00561-201ENST00000565815 PCSK6P29122 969 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 MAGEA10P43363 369 aaPredicted RBP4.66□□□□□ -1.66
LINC00561-201ENST00000565815 PGDP52209 483 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 ZACNQ401N2 412 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 SASS6Q6UVJ0 657 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 MED15Q96RN5 788 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 RMDN3Q96TC7 470 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 MACROD1Q9BQ69 325 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 EIF2AK1Q9BQI3 630 aaKnown RBP4.66□□□□□ -1.66
LINC00561-201ENST00000565815 WDR11Q9BZH6 1224 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 SIK2Q9H0K1 926 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 MYLK2Q9H1R3 596 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 C11orf49Q9H6J7 331 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 NOX1Q9Y5S8 564 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 MAST3O60307 1309 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 COL4A1P02462 1669 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 KAT6AQ92794 2004 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 CHL1O00533 1208 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 SKAP2O75563 359 aaPredicted RBP4.66□□□□□ -1.66
LINC00561-201ENST00000565815 CYP21A2P08686 494 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 IL6RP08887 468 aaPredicted RBP4.66□□□□□ -1.66
LINC00561-201ENST00000565815 UQCRC1P31930 480 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 SERPINF1P36955 418 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 COPAP53621 1224 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 DEUP1Q05D60 604 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 TREML2Q5T2D2 321 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 CEP85Q6P2H3 762 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 ABRAQ8N0Z2 381 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 DVL3Q92997 716 aaPredicted RBP4.66□□□□□ -1.66
LINC00561-201ENST00000565815 ZNF341Q9BYN7 854 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 MMRN2Q9H8L6 949 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 INTS13Q9NVM9 706 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 CWC25Q9NXE8 425 aaPredicted RBP4.66□□□□□ -1.66
LINC00561-201ENST00000565815 ST3GAL5Q9UNP4 418 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 M0QZQ0 153 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 M0R3H8 397 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 AP4M1O00189 453 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 AREL1O15033 823 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 TAF5LO75529 589 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 EIF3JO75822 258 aaKnown RBP4.66□□□□□ -1.66
LINC00561-201ENST00000565815 LAG3P18627 525 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 FPR3P25089 353 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 WNT3P56703 355 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 BTKQ06187 659 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 CYP1B1Q16678 543 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 MRGPREQ86SM8 312 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 SPARTQ8N0X7 666 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 CLMNQ96JQ2 1002 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 LBHD1Q9BQE6 289 aaPredicted RBP4.66□□□□□ -1.66
LINC00561-201ENST00000565815 CLCA2Q9UQC9 943 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 PCDHB2Q9Y5E7 798 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 ATP6V1DQ9Y5K8 247 aa4.66□□□□□ -1.66
LINC00561-201ENST00000565815 BTBD19C9JJ37 291 aa4.65□□□□□ -1.66
LINC00561-201ENST00000565815 CD3EAPO15446 510 aaKnown RBP4.65□□□□□ -1.66
LINC00561-201ENST00000565815 CBFA2T3O75081 653 aa4.65□□□□□ -1.66
LINC00561-201ENST00000565815 EIF2S2P20042 333 aaKnown RBP4.65□□□□□ -1.66
LINC00561-201ENST00000565815 PBX1P40424 430 aa4.65□□□□□ -1.66
LINC00561-201ENST00000565815 KCNJ4P48050 445 aa4.65□□□□□ -1.66
LINC00561-201ENST00000565815 PRKG1Q13976 671 aa4.65□□□□□ -1.66
LINC00561-201ENST00000565815 KRTAP19-4Q3LI73 84 aa4.65□□□□□ -1.66
LINC00561-201ENST00000565815 CAVIN1Q6NZI2 390 aaKnown RBP4.65□□□□□ -1.66
LINC00561-201ENST00000565815 TLDC1Q6P9B6 456 aa4.65□□□□□ -1.66
LINC00561-201ENST00000565815 CAND1Q86VP6 1230 aaKnown RBP4.65□□□□□ -1.66
LINC00561-201ENST00000565815 TBC1D22AQ8WUA7 517 aa4.65□□□□□ -1.66
LINC00561-201ENST00000565815 XAGE5Q8WWM1 108 aa4.65□□□□□ -1.66
LINC00561-201ENST00000565815 GRAMD1AQ96CP6 724 aa4.65□□□□□ -1.66
LINC00561-201ENST00000565815 PRPF18Q99633 342 aaKnown RBP4.65□□□□□ -1.66
LINC00561-201ENST00000565815 MECRQ9BV79 373 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms