RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 PON1P27169 355 aa24.6■■□□□ 1.53
RAB40C-209ENST00000565511 USP8P40818 1118 aa24.6■■□□□ 1.53
RAB40C-209ENST00000565511 E2F5Q15329 346 aa24.6■■□□□ 1.53
RAB40C-209ENST00000565511 UNQ6494/PRO21346Q6UXR6 183 aa24.6■■□□□ 1.53
RAB40C-209ENST00000565511 BEND5Q7L4P6 421 aa24.6■■□□□ 1.53
RAB40C-209ENST00000565511 CIR1Q86X95 450 aaPredicted RBP24.6■■□□□ 1.53
RAB40C-209ENST00000565511 LGI2Q8N0V4 545 aa24.6■■□□□ 1.53
RAB40C-209ENST00000565511 ADAM33Q9BZ11 813 aa24.6■■□□□ 1.53
RAB40C-209ENST00000565511 APEX2Q9UBZ4 518 aa24.6■■□□□ 1.53
RAB40C-209ENST00000565511 CABIN1Q9Y6J0 2220 aa24.59■■□□□ 1.53
RAB40C-209ENST00000565511 MED7O43513 233 aa24.59■■□□□ 1.53
RAB40C-209ENST00000565511 SIN3BO75182 1162 aa24.59■■□□□ 1.53
RAB40C-209ENST00000565511 FGFR1OPO95684 399 aaKnown RBP24.59■■□□□ 1.53
RAB40C-209ENST00000565511 PROS1P07225 676 aa24.59■■□□□ 1.53
RAB40C-209ENST00000565511 TACR2P21452 398 aa24.59■■□□□ 1.53
RAB40C-209ENST00000565511 PITRM1Q5JRX3 1037 aa24.59■■□□□ 1.53
RAB40C-209ENST00000565511 DPY19L2P1Q6NXN4 242 aa24.59■■□□□ 1.53
RAB40C-209ENST00000565511 LAYNQ6UX15 382 aa24.59■■□□□ 1.53
RAB40C-209ENST00000565511 GBP6Q6ZN66 633 aa24.59■■□□□ 1.53
RAB40C-209ENST00000565511 ENOSF1Q7L5Y1 443 aa24.59■■□□□ 1.53
RAB40C-209ENST00000565511 SNX19Q92543 992 aa24.59■■□□□ 1.53
RAB40C-209ENST00000565511 GATA6Q92908 595 aa24.59■■□□□ 1.53
RAB40C-209ENST00000565511 POPDC2Q9HBU9 364 aa24.59■■□□□ 1.53
RAB40C-209ENST00000565511 SERGEFQ9UGK8 458 aa24.59■■□□□ 1.53
RAB40C-209ENST00000565511 KLK13Q9UKR3 277 aa24.59■■□□□ 1.53
RAB40C-209ENST00000565511 BCAT2O15382 392 aaPredicted RBP24.58■■□□□ 1.53
RAB40C-209ENST00000565511 LUC7L3O95232 432 aaKnown RBP24.58■■□□□ 1.53
RAB40C-209ENST00000565511 ATP5BP06576 529 aaKnown RBP24.58■■□□□ 1.53
RAB40C-209ENST00000565511 CHSY1Q86X52 802 aa24.58■■□□□ 1.53
RAB40C-209ENST00000565511 DHX40Q8IX18 779 aaKnown RBP24.58■■□□□ 1.53
RAB40C-209ENST00000565511 APCDD1Q8J025 514 aa24.58■■□□□ 1.53
RAB40C-209ENST00000565511 PRMT1Q99873 361 aaKnown RBP24.58■■□□□ 1.53
RAB40C-209ENST00000565511 ORAI3Q9BRQ5 295 aa24.58■■□□□ 1.53
RAB40C-209ENST00000565511 FNDC3AQ9Y2H6 1198 aaKnown RBP24.58■■□□□ 1.53
RAB40C-209ENST00000565511 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.58■■□□□ 1.53
RAB40C-209ENST00000565511 WDFY3Q8IZQ1 3526 aa24.57■■□□□ 1.52
RAB40C-209ENST00000565511 A0A1B0GVT2 93 aa24.57■■□□□ 1.52
RAB40C-209ENST00000565511 TTC34A8MYJ7 566 aa24.57■■□□□ 1.52
RAB40C-209ENST00000565511 CAPN9O14815 690 aa24.57■■□□□ 1.52
RAB40C-209ENST00000565511 GRAP2O75791 330 aa24.57■■□□□ 1.52
RAB40C-209ENST00000565511 IRAK1P51617 712 aa24.57■■□□□ 1.52
RAB40C-209ENST00000565511 YWHAZP63104 245 aaKnown RBP24.57■■□□□ 1.52
RAB40C-209ENST00000565511 CDH18Q13634 790 aa24.57■■□□□ 1.52
RAB40C-209ENST00000565511 EXOC3L4Q17RC7 722 aa24.57■■□□□ 1.52
RAB40C-209ENST00000565511 ZNF776Q68DI1 518 aaPredicted RBP24.57■■□□□ 1.52
RAB40C-209ENST00000565511 DEFB106AQ8N104 65 aa24.57■■□□□ 1.52
RAB40C-209ENST00000565511 C1orf131Q8NDD1 294 aaKnown RBP24.57■■□□□ 1.52
RAB40C-209ENST00000565511 SLC2A13Q96QE2 648 aa24.57■■□□□ 1.52
RAB40C-209ENST00000565511 DDX50Q9BQ39 737 aaKnown RBP24.57■■□□□ 1.52
RAB40C-209ENST00000565511 RSPH9Q9H1X1 276 aaPredicted RBP24.57■■□□□ 1.52
RAB40C-209ENST00000565511 THAP9Q9H5L6 903 aa24.57■■□□□ 1.52
RAB40C-209ENST00000565511 ERVW-1Q9UQF0 538 aa24.57■■□□□ 1.52
RAB40C-209ENST00000565511 SYNJ2BP-COX16A0A087WUM0 186 aa24.56■■□□□ 1.52
RAB40C-209ENST00000565511 SEMA4FO95754 770 aa24.56■■□□□ 1.52
RAB40C-209ENST00000565511 APOEP02649 317 aa24.56■■□□□ 1.52
RAB40C-209ENST00000565511 ERBB2P04626 1255 aa24.56■■□□□ 1.52
RAB40C-209ENST00000565511 STK19P49842 368 aaPredicted RBP24.56■■□□□ 1.52
RAB40C-209ENST00000565511 HNRNPA1L2Q32P51 320 aaKnown RBP24.56■■□□□ 1.52
RAB40C-209ENST00000565511 OTUD1Q5VV17 481 aaPredicted RBP24.56■■□□□ 1.52
RAB40C-209ENST00000565511 FAM183BPQ6ZVS7 135 aa24.56■■□□□ 1.52
RAB40C-209ENST00000565511 NAXDQ8IW45 347 aa24.56■■□□□ 1.52
RAB40C-209ENST00000565511 PABPC3Q9H361 631 aaKnown RBP24.56■■□□□ 1.52
RAB40C-209ENST00000565511 CLSTN2Q9H4D0 955 aa24.56■■□□□ 1.52
RAB40C-209ENST00000565511 FBRSQ9HAH7 460 aa24.56■■□□□ 1.52
RAB40C-209ENST00000565511 PLCB1Q9NQ66 1216 aa24.56■■□□□ 1.52
RAB40C-209ENST00000565511 COX16Q9P0S2 106 aa24.56■■□□□ 1.52
RAB40C-209ENST00000565511 SLCO3A1Q9UIG8 710 aa24.56■■□□□ 1.52
RAB40C-209ENST00000565511 ZZEF1O43149 2961 aa24.56■■□□□ 1.52
RAB40C-209ENST00000565511 FAM170AA1A519 330 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 GTPBP10A4D1E9 387 aaKnown RBP24.55■■□□□ 1.52
RAB40C-209ENST00000565511 KCNU1A8MYU2 1149 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 DNTTP04053 509 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 CLCN1P35523 988 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 GGCXP38435 758 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 MTIF2P46199 727 aaKnown RBP24.55■■□□□ 1.52
RAB40C-209ENST00000565511 CSNK1EP49674 416 aaKnown RBP24.55■■□□□ 1.52
RAB40C-209ENST00000565511 DPCR1Q3MIW9 517 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 PTPN20Q4JDL3 420 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 HSP90AA4PQ58FG1 418 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 KCNT1Q5JUK3 1230 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 C9orf64Q5T6V5 341 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 SLC47A2Q86VL8 602 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 BIRC7Q96CA5 298 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 PPP1R13BQ96KQ4 1090 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 BTN2A3PQ96KV6 586 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 PCED1AQ9H1Q7 454 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 GAREM1Q9H706 876 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 FAM204AQ9H8W3 233 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 SUN2Q9UH99 717 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 DNAJC12Q9UKB3 198 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 PCDHGC3Q9UN70 934 aa24.55■■□□□ 1.52
RAB40C-209ENST00000565511 TYW5A2RUC4 315 aaKnown RBP24.54■■□□□ 1.52
RAB40C-209ENST00000565511 FOXN3O00409 490 aaPredicted RBP24.54■■□□□ 1.52
RAB40C-209ENST00000565511 CBFA2T3O75081 653 aa24.54■■□□□ 1.52
RAB40C-209ENST00000565511 ASLP04424 464 aa24.54■■□□□ 1.52
RAB40C-209ENST00000565511 IGHV4-34P06331 123 aa24.54■■□□□ 1.52
RAB40C-209ENST00000565511 CENPCQ03188 943 aa24.54■■□□□ 1.52
RAB40C-209ENST00000565511 ZBTB16Q05516 673 aa24.54■■□□□ 1.52
RAB40C-209ENST00000565511 SLC14A1Q13336 389 aa24.54■■□□□ 1.52
RAB40C-209ENST00000565511 HLA-BQ31612 363 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms