RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 PITX1P78337 314 aaPredicted RBP20.57■□□□□ 0.88
CLN6-206ENST00000565471 CDK17Q00537 523 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 ARID5BQ14865 1188 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 TAF5Q15542 800 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 CT47A1Q5JQC4 288 aaPredicted RBP20.57■□□□□ 0.88
CLN6-206ENST00000565471 MIIPQ5JXC2 388 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 RAP1GAP2Q684P5 730 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 CLEC17AQ6ZS10 378 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 C11orf57Q6ZUT1 292 aaPredicted RBP20.57■□□□□ 0.88
CLN6-206ENST00000565471 CHSY1Q86X52 802 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 PASD1Q8IV76 773 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 FAM71AQ8IYT1 594 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 DEFB106AQ8N104 65 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 CFAP52Q8N1V2 620 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 ATP6V0D2Q8N8Y2 350 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 C1orf131Q8NDD1 294 aaKnown RBP20.57■□□□□ 0.88
CLN6-206ENST00000565471 ZDHHC5Q9C0B5 715 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 FAM204AQ9H8W3 233 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 KIAA1522Q9P206 1035 aaPredicted RBP20.57■□□□□ 0.88
CLN6-206ENST00000565471 SLC12A6Q9UHW9 1150 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 CACNA1EQ15878 2313 aa20.56■□□□□ 0.88
CLN6-206ENST00000565471 KCNU1A8MYU2 1149 aa20.56■□□□□ 0.88
CLN6-206ENST00000565471 F5H5T6 163 aa20.56■□□□□ 0.88
CLN6-206ENST00000565471 FOXN3O00409 490 aaPredicted RBP20.56■□□□□ 0.88
CLN6-206ENST00000565471 MOCS3O95396 460 aa20.56■□□□□ 0.88
CLN6-206ENST00000565471 DNTTP04053 509 aa20.56■□□□□ 0.88
CLN6-206ENST00000565471 CCR1P32246 355 aa20.56■□□□□ 0.88
CLN6-206ENST00000565471 KRT9P35527 623 aa20.56■□□□□ 0.88
CLN6-206ENST00000565471 BPIFB4P59827 614 aa20.56■□□□□ 0.88
CLN6-206ENST00000565471 MTA1Q13330 715 aa20.56■□□□□ 0.88
CLN6-206ENST00000565471 HNRNPA1L2Q32P51 320 aaKnown RBP20.56■□□□□ 0.88
CLN6-206ENST00000565471 TTC31Q49AM3 519 aaPredicted RBP20.56■□□□□ 0.88
CLN6-206ENST00000565471 FSCBQ5H9T9 825 aa20.56■□□□□ 0.88
CLN6-206ENST00000565471 PITRM1Q5JRX3 1037 aa20.56■□□□□ 0.88
CLN6-206ENST00000565471 DPY19L2P1Q6NXN4 242 aa20.56■□□□□ 0.88
CLN6-206ENST00000565471 OLFML1Q6UWY5 402 aa20.56■□□□□ 0.88
CLN6-206ENST00000565471 SLC47A2Q86VL8 602 aa20.56■□□□□ 0.88
CLN6-206ENST00000565471 MRGPRX3Q96LB0 322 aa20.56■□□□□ 0.88
CLN6-206ENST00000565471 PRMT1Q99873 361 aaKnown RBP20.56■□□□□ 0.88
CLN6-206ENST00000565471 CEP83Q9Y592 693 aa20.56■□□□□ 0.88
CLN6-206ENST00000565471 H0Y626 953 aa20.55■□□□□ 0.88
CLN6-206ENST00000565471 GJB3O75712 270 aa20.55■□□□□ 0.88
CLN6-206ENST00000565471 SRPRAP08240 638 aaKnown RBP20.55■□□□□ 0.88
CLN6-206ENST00000565471 GRIK2Q13002 908 aa20.55■□□□□ 0.88
CLN6-206ENST00000565471 SLC14A1Q13336 389 aa20.55■□□□□ 0.88
CLN6-206ENST00000565471 TTC39BQ5VTQ0 682 aaPredicted RBP20.55■□□□□ 0.88
CLN6-206ENST00000565471 ZNF776Q68DI1 518 aaPredicted RBP20.55■□□□□ 0.88
CLN6-206ENST00000565471 FAM183BPQ6ZVS7 135 aa20.55■□□□□ 0.88
CLN6-206ENST00000565471 SLC26A9Q7LBE3 791 aa20.55■□□□□ 0.88
CLN6-206ENST00000565471 FAM124AQ86V42 546 aa20.55■□□□□ 0.88
CLN6-206ENST00000565471 ZCCHC9Q8N567 271 aaKnown RBP20.55■□□□□ 0.88
CLN6-206ENST00000565471 ZNF397Q8NF99 534 aaPredicted RBP20.55■□□□□ 0.88
CLN6-206ENST00000565471 RSPH9Q9H1X1 276 aaPredicted RBP20.55■□□□□ 0.88
CLN6-206ENST00000565471 DDIT4Q9NX09 232 aa20.55■□□□□ 0.88
CLN6-206ENST00000565471 SCML1Q9UN30 329 aa20.55■□□□□ 0.88
CLN6-206ENST00000565471 ERVW-1Q9UQF0 538 aa20.55■□□□□ 0.88
CLN6-206ENST00000565471 ITIH6Q6UXX5 1313 aa20.54■□□□□ 0.88
CLN6-206ENST00000565471 BCAT2O15382 392 aaPredicted RBP20.54■□□□□ 0.88
CLN6-206ENST00000565471 DAB1O75553 588 aa20.54■□□□□ 0.88
CLN6-206ENST00000565471 ERBB2P04626 1255 aa20.54■□□□□ 0.88
CLN6-206ENST00000565471 ABCB4P21439 1286 aa20.54■□□□□ 0.88
CLN6-206ENST00000565471 ACSL1P33121 698 aa20.54■□□□□ 0.88
CLN6-206ENST00000565471 SLC6A3Q01959 620 aa20.54■□□□□ 0.88
CLN6-206ENST00000565471 SLC12A1Q13621 1099 aa20.54■□□□□ 0.88
CLN6-206ENST00000565471 PTPN20Q4JDL3 420 aa20.54■□□□□ 0.88
CLN6-206ENST00000565471 OR6B2Q6IFH4 312 aa20.54■□□□□ 0.88
CLN6-206ENST00000565471 MMS22LQ6ZRQ5 1243 aa20.54■□□□□ 0.88
CLN6-206ENST00000565471 ZDHHC17Q8IUH5 632 aa20.54■□□□□ 0.88
CLN6-206ENST00000565471 OR2I1PQ8NGU4 316 aa20.54■□□□□ 0.88
CLN6-206ENST00000565471 C1orf216Q8TAB5 229 aa20.54■□□□□ 0.88
CLN6-206ENST00000565471 BTBD1Q9H0C5 482 aa20.54■□□□□ 0.88
CLN6-206ENST00000565471 MIR1-1HGQ9H1L0 117 aa20.54■□□□□ 0.88
CLN6-206ENST00000565471 EIF2B4Q9UI10 523 aaKnown RBP20.54■□□□□ 0.88
CLN6-206ENST00000565471 WASF3Q9UPY6 502 aa20.54■□□□□ 0.88
CLN6-206ENST00000565471 TARSL2A2RTX5 802 aaKnown RBP20.53■□□□□ 0.88
CLN6-206ENST00000565471 GRAP2O75791 330 aa20.53■□□□□ 0.88
CLN6-206ENST00000565471 SEMA4FO95754 770 aa20.53■□□□□ 0.88
CLN6-206ENST00000565471 PNMA6AP0CW24 399 aaPredicted RBP20.53■□□□□ 0.88
CLN6-206ENST00000565471 CD59P13987 128 aa20.53■□□□□ 0.88
CLN6-206ENST00000565471 EEF1GP26641 437 aaKnown RBP20.53■□□□□ 0.88
CLN6-206ENST00000565471 CDH5P33151 784 aaPredicted RBP20.53■□□□□ 0.88
CLN6-206ENST00000565471 ECT2LQ008S8 904 aa20.53■□□□□ 0.88
CLN6-206ENST00000565471 KCNMA1Q12791 1236 aa20.53■□□□□ 0.88
CLN6-206ENST00000565471 HNRNPDQ14103 355 aaKnown RBP20.53■□□□□ 0.88
CLN6-206ENST00000565471 KCNJ12Q14500 433 aa20.53■□□□□ 0.88
CLN6-206ENST00000565471 HSP90AA4PQ58FG1 418 aa20.53■□□□□ 0.88
CLN6-206ENST00000565471 RABGAP1LQ5R372 815 aa20.53■□□□□ 0.88
CLN6-206ENST00000565471 KLHDC7AQ5VTJ3 777 aa20.53■□□□□ 0.88
CLN6-206ENST00000565471 USP30Q70CQ3 517 aa20.53■□□□□ 0.88
CLN6-206ENST00000565471 MTG2Q9H4K7 406 aa20.53■□□□□ 0.88
CLN6-206ENST00000565471 C6orf106Q9H6K1 298 aaPredicted RBP20.53■□□□□ 0.88
CLN6-206ENST00000565471 SYNCQ9H7C4 482 aa20.53■□□□□ 0.88
CLN6-206ENST00000565471 SGK2Q9HBY8 427 aa20.53■□□□□ 0.88
CLN6-206ENST00000565471 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.53■□□□□ 0.88
CLN6-206ENST00000565471 PCNX2A6NKB5 2137 aa20.53■□□□□ 0.88
CLN6-206ENST00000565471 A0A1B0GVM2 712 aa20.52■□□□□ 0.88
CLN6-206ENST00000565471 TCAF2A6NFQ2 919 aa20.52■□□□□ 0.88
CLN6-206ENST00000565471 RNASEH1O60930 286 aaKnown RBP20.52■□□□□ 0.88
CLN6-206ENST00000565471 SIN3BO75182 1162 aa20.52■□□□□ 0.88
CLN6-206ENST00000565471 NOS2P35228 1153 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms