RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 KLHL11Q9NVR0 708 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 NCKIPSDQ9NZQ3 722 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 SEPT10Q9P0V9 454 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 SEL1LQ9UBV2 794 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 PLEKHB1Q9UF11 243 aaPredicted RBP9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 NAGPAQ9UK23 515 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 CFAP45Q9UL16 551 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 DMTF1Q9Y222 760 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 ENTPD2Q9Y5L3 495 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 A0A1W2PNU3 283 aaPredicted RBP9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 A0A1W2PQH9 124 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 F13A1P00488 732 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 ITGA2BP08514 1039 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 TNNI1P19237 187 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 HLA-FP30511 346 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 ATICP31939 592 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 DDIT3P35638 169 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 KCNA1Q09470 495 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 MORC3Q14149 939 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 MBLAC2Q68D91 279 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 RBM44Q6ZP01 1051 aaKnown RBP9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 ADIPOR2Q86V24 386 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 FUKQ8N0W3 1084 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 AHI1Q8N157 1196 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 RASSF8Q8NHQ8 419 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 ZNF564Q8TBZ8 553 aaPredicted RBP9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 IFI44Q8TCB0 444 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 RAD54LQ92698 747 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 IPO9Q96P70 1041 aaKnown RBP9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 DUSP23Q9BVJ7 150 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 NMUR1Q9HB89 426 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 KIAA1586Q9HCI6 787 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 KRT82Q9NSB4 513 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 ABCB8Q9NUT2 735 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 NLGN3Q9NZ94 848 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 CLIC5Q9NZA1 410 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 SERGEFQ9UGK8 458 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 ANAPC2Q9UJX6 822 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 GGA2Q9UJY4 613 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 PCDHA5Q9Y5H7 936 aa9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 ARID1BQ8NFD5 2236 aaPredicted RBP9.43□□□□□ -0.9
VPS9D1-205ENST00000565452 TMEM131Q92545 1883 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 CCDC187A0A096LP49 1063 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 SLC12A8A0AV02 714 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 C10orf142B7Z368 130 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 PRAMEF26H0Y7S4 382 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 SCAMP1O15126 338 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 LATO43561 262 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 TCEA3O75764 348 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 PPP1R37O75864 691 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 BEST1O76090 585 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 PABPC1P11940 636 aaKnown RBP9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 GAP43P17677 238 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 TRIM21P19474 475 aaKnown RBP9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 C5AR1P21730 350 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 TGM2P21980 687 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 CASRP41180 1078 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 ZNF445P59923 1031 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 EFEMP1Q12805 493 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 SKIDA1Q1XH10 827 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 MANEAQ5SRI9 462 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 HIST2H2BCQ6DN03 193 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 KIAA0907Q7Z7F0 614 aaPredicted RBP9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 SFR1Q86XK3 245 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 MMAAQ8IVH4 418 aaKnown RBP9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 ZMIZ2Q8NF64 920 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 SPATA20Q8TB22 786 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 PHF12Q96QT6 1004 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 CBWD1Q9BRT8 395 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 EPN3Q9H201 632 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 KDM4CQ9H3R0 1056 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 BLOC1S4Q9NUP1 217 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 UCKL1Q9NWZ5 548 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 ARHGAP20Q9P2F6 1191 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 RASAL2Q9UJF2 1139 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 STRIP2Q9ULQ0 834 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 PCDHGA7Q9Y5G6 932 aa9.42□□□□□ -0.9
VPS9D1-205ENST00000565452 TARSL2A2RTX5 802 aaKnown RBP9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 CPED1A4D0V7 1026 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 TMX2-CTNND1H3BSU7 103 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 NOBOXO60393 691 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 RNGTTO60942 597 aaKnown RBP9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 SIN3BO75182 1162 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 GCNT3O95395 438 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 STAU1O95793 577 aaKnown RBP9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 ADH1BP00325 375 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 HOXD9P28356 352 aaPredicted RBP9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 SLC5A2P31639 672 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 ADPRHP54922 357 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 EHHADHQ08426 723 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 KCNMA1Q12791 1236 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 ALCAMQ13740 583 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 BMT2Q1RMZ1 405 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 HNRNPA1L2Q32P51 320 aaKnown RBP9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 C9orf64Q5T6V5 341 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 ACOT1Q86TX2 421 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 FAM217AQ8IXS0 508 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 CRYBG2Q8N1P7 616 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms