RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 DEUP1Q05D60 604 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 HNRNPDQ14103 355 aaKnown RBP7.45□□□□□ -1.22
SMG1-210ENST00000565224 PDK1Q15118 436 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 C11orf91Q3C1V1 193 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 Q3C1V9 767 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 CCDC153Q494R4 210 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 SPANXN3Q5MJ09 141 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 GRTP1Q5TC63 336 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 PGM2L1Q6PCE3 622 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 ATG14Q6ZNE5 492 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 RAPH1Q70E73 1250 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 MFN1Q8IWA4 741 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 GALNT15Q8N3T1 639 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 SHKBP1Q8TBC3 707 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 PYDC1Q8WXC3 89 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 PGBD4Q96DM1 585 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 CERS2Q96G23 380 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 HSFY1Q96LI6 401 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 CXCL16Q9H2A7 254 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 VCX3BQ9H321 246 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 ELP3Q9H9T3 547 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 ZDHHC7Q9NXF8 308 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 SNTG2Q9NY99 539 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 RNF181Q9P0P0 153 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 SEPT10Q9P0V9 454 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 CDH22Q9UJ99 828 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 ADAM28Q9UKQ2 775 aa7.45□□□□□ -1.22
SMG1-210ENST00000565224 ZSWIM8A7E2V4 1837 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 SF3B1O75533 1304 aaKnown RBP eCLIP7.44□□□□□ -1.228e-6■■■■■ 107
SMG1-210ENST00000565224 HCRTO43612 131 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 PDE5AO76074 875 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 PDGFRBP09619 1106 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 ZNF286BP0CG31 522 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 ERVK-10P10266 1014 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 NCF2P19878 526 aaPredicted RBP7.44□□□□□ -1.22
SMG1-210ENST00000565224 PRDX6P30041 224 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 MATKP42679 507 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 MAGEA12P43365 314 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 SERPINB8P50452 374 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 XIAPP98170 497 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 ASPHQ12797 758 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 IFRD2Q12894 506 aaPredicted RBP7.44□□□□□ -1.22
SMG1-210ENST00000565224 ITGA9Q13797 1035 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 CCNIQ14094 377 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 SMAD1Q15797 465 aaKnown RBP7.44□□□□□ -1.22
SMG1-210ENST00000565224 ZBTB6Q15916 424 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 SLC25A52Q3SY17 297 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 GJC2Q5T442 439 aaPredicted RBP7.44□□□□□ -1.22
SMG1-210ENST00000565224 VWA5B1Q5TIE3 1220 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 C9orf57Q5W0N0 161 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 CWF19L1Q69YN2 538 aaKnown RBP7.44□□□□□ -1.22
SMG1-210ENST00000565224 DLK2Q6UY11 383 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 ARMCX2Q7L311 632 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 ZNF410Q86VK4 478 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 PDSS2Q86YH6 399 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 CRYBG2Q8N1P7 616 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 ZNF784Q8NCA9 323 aaPredicted RBP7.44□□□□□ -1.22
SMG1-210ENST00000565224 OR6Y1Q8NGX8 325 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 SLC26A7Q8TE54 656 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 RNF139Q8WU17 664 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 ZFAND2BQ8WV99 257 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 ISL2Q96A47 359 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 C18orf25Q96B23 403 aaPredicted RBP7.44□□□□□ -1.22
SMG1-210ENST00000565224 CEP41Q9BYV8 373 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 MROH8Q9H579 483 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 SNX15Q9NRS6 342 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 IGSF9Q9P2J2 1179 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 PCDHB12Q9Y5F1 795 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 CDY2AQ9Y6F7 541 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 CDY1Q9Y6F8 540 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 RPS6KL1Q9Y6S9 549 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 KAT6AQ92794 2004 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 PTPRFP10586 1907 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 CXCL11O14625 94 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 DAB1O75553 588 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 ZCCHC18P0CG32 403 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 ITGAXP20702 1163 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 YY1P25490 414 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 SPRP35270 261 aaPredicted RBP7.44□□□□□ -1.22
SMG1-210ENST00000565224 MLH1P40692 756 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 CUL3Q13618 768 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 FSCBQ5H9T9 825 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 CFAP157Q5JU67 520 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 CES3Q6UWW8 571 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 ACAD11Q709F0 780 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 CMC1Q7Z7K0 106 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 DEFB107AQ8IZN7 70 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 DEFB106AQ8N104 65 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 ZNF567Q8N184 647 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 NME8Q8N427 588 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 DCLK2Q8N568 766 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 NETO2Q8NC67 525 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 CCNYQ8ND76 341 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 PPTC7Q8NI37 304 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 SLC2A14Q8TDB8 520 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 KBTBD7Q8WVZ9 684 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 CCDC124Q96CT7 223 aaKnown RBP7.44□□□□□ -1.22
SMG1-210ENST00000565224 TUBGCP5Q96RT8 1024 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 RBBP8Q99708 897 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 DDX50Q9BQ39 737 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms