RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 NENFQ9UMX5 172 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 PLA2G4CQ9UP65 541 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 SLC8A2Q9UPR5 921 aa16.49■□□□□ 0.23
RAB40C-208ENST00000564703 A0A1B0GVM2 712 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 TCAF2A6NFQ2 919 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 CHURC1-FNTBB4DL54 471 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 E9PAM4 449 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 ATP5BP06576 529 aaKnown RBP16.48■□□□□ 0.23
RAB40C-208ENST00000564703 PABPC1P11940 636 aaKnown RBP16.48■□□□□ 0.23
RAB40C-208ENST00000564703 POLR2EP19388 210 aaKnown RBP16.48■□□□□ 0.23
RAB40C-208ENST00000564703 GGCXP38435 758 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 SSR1P43307 286 aaKnown RBP16.48■□□□□ 0.23
RAB40C-208ENST00000564703 CDH4P55283 916 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 EIF4HQ15056 248 aaKnown RBP16.48■□□□□ 0.23
RAB40C-208ENST00000564703 ERMARDQ5T6L9 678 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 EMC10Q5UCC4 262 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 Q6ZS52 159 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 CHST9Q7L1S5 443 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 C14orf80Q86SX3 495 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 RHOT2Q8IXI1 618 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 AHI1Q8N157 1196 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 CCAR2Q8N163 923 aaKnown RBP16.48■□□□□ 0.23
RAB40C-208ENST00000564703 CCDC185Q8N715 623 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 ZNF513Q8N8E2 541 aaPredicted RBP16.48■□□□□ 0.23
RAB40C-208ENST00000564703 SLC35G2Q8TBE7 412 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 ZNF564Q8TBZ8 553 aaPredicted RBP16.48■□□□□ 0.23
RAB40C-208ENST00000564703 USP33Q8TEY7 942 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 IGSF8Q969P0 613 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 ARHGEF26Q96DR7 871 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 PACSIN1Q9BY11 444 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 CIPCQ9C0C6 399 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 IRF2BPLQ9H1B7 796 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 KCNH6Q9H252 994 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 ANLNQ9NQW6 1124 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 ELOVL2Q9NXB9 296 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 GGA2Q9UJY4 613 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 STARD13Q9Y3M8 1113 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 PCDHA13Q9Y5I0 950 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 SNX10Q9Y5X0 201 aa16.48■□□□□ 0.23
RAB40C-208ENST00000564703 DRGXA6NNA5 263 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 EIF3CLB5ME19 914 aaKnown RBP16.47■□□□□ 0.23
RAB40C-208ENST00000564703 PRRT4C9JH25 899 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 NPC1O15118 1278 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 ZBTB24O43167 697 aaPredicted RBP16.47■□□□□ 0.23
RAB40C-208ENST00000564703 KLF8O95600 359 aaPredicted RBP16.47■□□□□ 0.23
RAB40C-208ENST00000564703 HLA-FP30511 346 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 PCK1P35558 622 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 MRE11P49959 708 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 MESP2Q0VG99 397 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 SLC12A1Q13621 1099 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 DMC1Q14565 340 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 HADHQ16836 314 aaKnown RBP16.47■□□□□ 0.23
RAB40C-208ENST00000564703 GEN1Q17RS7 908 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 C5orf22Q49AR2 442 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 BOLA3Q53S33 107 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 EOGTQ5NDL2 527 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 RWDD4Q6NW29 188 aaKnown RBP16.47■□□□□ 0.23
RAB40C-208ENST00000564703 CCDC33Q8N5R6 958 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 EZH1Q92800 747 aaPredicted RBP16.47■□□□□ 0.23
RAB40C-208ENST00000564703 MYEOVQ96EZ4 313 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 P2RY11Q96G91 374 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 EIF3CQ99613 913 aaKnown RBP16.47■□□□□ 0.23
RAB40C-208ENST00000564703 TRIM7Q9C029 511 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 ZYG11BQ9C0D3 744 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 RETREG1Q9H6L5 497 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 PPARGC1AQ9UBK2 798 aaKnown RBP16.47■□□□□ 0.23
RAB40C-208ENST00000564703 FZD10Q9ULW2 581 aa16.47■□□□□ 0.23
RAB40C-208ENST00000564703 MYO18AQ92614 2054 aaKnown RBP16.46■□□□□ 0.23
RAB40C-208ENST00000564703 SOWAHDA6NJG2 315 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 I6L893 689 aaPredicted RBP16.46■□□□□ 0.23
RAB40C-208ENST00000564703 NRDCO43847 1150 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 NDUFA10O95299 355 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 LCA5LO95447 670 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 MIPP30301 263 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 OR1E1P30953 314 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 L1CAMP32004 1257 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 KIR2DL1P43626 348 aaPredicted RBP16.46■□□□□ 0.23
RAB40C-208ENST00000564703 NOP2P46087 812 aaKnown RBP16.46■□□□□ 0.23
RAB40C-208ENST00000564703 KRT83P78385 493 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 NRG1Q02297 640 aaPredicted RBP16.46■□□□□ 0.23
RAB40C-208ENST00000564703 CSTF1Q05048 431 aaKnown RBP16.46■□□□□ 0.23
RAB40C-208ENST00000564703 SCAPQ12770 1279 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 GAS6Q14393 721 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 ANGPT1Q15389 498 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 CIR1Q86X95 450 aaPredicted RBP16.46■□□□□ 0.23
RAB40C-208ENST00000564703 SFTPA1Q8IWL2 248 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 CHPFQ8IZ52 775 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 TXLNBQ8N3L3 684 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 ALLCQ8N6M5 410 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 TXNDC5Q8NBS9 432 aaKnown RBP16.46■□□□□ 0.23
RAB40C-208ENST00000564703 BTBD6Q96KE9 485 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 EPAS1Q99814 870 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 MPP6Q9NZW5 540 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 USP18Q9UMW8 372 aa16.46■□□□□ 0.23
RAB40C-208ENST00000564703 IGLV3-10A0A075B6K4 115 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 DAPK3O43293 454 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 CREB3O43889 395 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 HNRNPLP14866 589 aaKnown RBP eCLIP16.45■□□□□ 0.22
RAB40C-208ENST00000564703 FECHP22830 423 aa16.45■□□□□ 0.22
RAB40C-208ENST00000564703 NTSR1P30989 418 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms