RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 ATP5BP06576 529 aaKnown RBP10.27□□□□□ -0.77
CDH1-206ENST00000564676 POLR2EP19388 210 aaKnown RBP10.27□□□□□ -0.77
CDH1-206ENST00000564676 GPD1P21695 349 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 CD70P32970 193 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 GGCXP38435 758 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 ATXN1P54253 815 aaKnown RBP10.27□□□□□ -0.77
CDH1-206ENST00000564676 GSCP56915 257 aaPredicted RBP10.27□□□□□ -0.77
CDH1-206ENST00000564676 ZBED6P86452 979 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 LMAN2Q12907 356 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 AUHQ13825 339 aaKnown RBP10.27□□□□□ -0.77
CDH1-206ENST00000564676 STARD3Q14849 445 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 USP39Q53GS9 565 aaKnown RBP10.27□□□□□ -0.77
CDH1-206ENST00000564676 TDRD12Q587J7 1177 aaKnown RBP10.27□□□□□ -0.77
CDH1-206ENST00000564676 TMEM215Q68D42 235 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 MBLAC2Q68D91 279 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 FBXL22Q6P050 247 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 DCUN1D2Q6PH85 259 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 MON1BQ7L1V2 547 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 MCOLN2Q8IZK6 566 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.27□□□□□ -0.77
CDH1-206ENST00000564676 SUMF1Q8NBK3 374 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 C3orf20Q8ND61 904 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 JOSD2Q8TAC2 188 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 FIBINQ8TAL6 211 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 WFDC5Q8TCV5 224 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 CYB5D2Q8WUJ1 264 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 HMGB4Q8WW32 186 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 GAB3Q8WWW8 586 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 RPRD1AQ96P16 312 aaPredicted RBP10.27□□□□□ -0.77
CDH1-206ENST00000564676 PRMT1Q99873 361 aaKnown RBP10.27□□□□□ -0.77
CDH1-206ENST00000564676 GABRG3Q99928 467 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 SYT11Q9BT88 431 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.27□□□□□ -0.77
CDH1-206ENST00000564676 TPSD1Q9BZJ3 242 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 EPC1Q9H2F5 836 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 ARHGEF38Q9NXL2 777 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 TAS2R14Q9NYV8 317 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 KIAA1522Q9P206 1035 aaPredicted RBP10.27□□□□□ -0.77
CDH1-206ENST00000564676 NCDNQ9UBB6 729 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 VANGL2Q9ULK5 521 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 CAPN11Q9UMQ6 739 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 PLA2G4CQ9UP65 541 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 SMG5Q9UPR3 1016 aaKnown RBP10.27□□□□□ -0.77
CDH1-206ENST00000564676 LUC7L2Q9Y383 392 aaKnown RBP10.27□□□□□ -0.77
CDH1-206ENST00000564676 RAD54BQ9Y620 910 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 BZW2Q9Y6E2 419 aaKnown RBP10.27□□□□□ -0.77
CDH1-206ENST00000564676 STON1Q9Y6Q2 735 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 FAM186AA6NE01 2351 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 ITIH6Q6UXX5 1313 aa10.27□□□□□ -0.77
CDH1-206ENST00000564676 RIF1Q5UIP0 2472 aaKnown RBP10.27□□□□□ -0.77
CDH1-206ENST00000564676 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.26□□□□□ -0.77
CDH1-206ENST00000564676 A0A1B0GVM2 712 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 TCAF2A6NFQ2 919 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 DDX3XO00571 662 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDH1-206ENST00000564676 SYNCRIPO60506 623 aaKnown RBP10.26□□□□□ -0.77
CDH1-206ENST00000564676 MOCS3O95396 460 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 FTLP02792 175 aaPredicted RBP10.26□□□□□ -0.77
CDH1-206ENST00000564676 GZMAP12544 262 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 DESP17661 470 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 RRM1P23921 792 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 RFC1P35251 1148 aaPredicted RBP10.26□□□□□ -0.77
CDH1-206ENST00000564676 IL12RB1P42701 662 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 ZNF177Q13360 481 aaPredicted RBP10.26□□□□□ -0.77
CDH1-206ENST00000564676 ZNF234Q14588 700 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 C15orf59Q2T9L4 293 aaPredicted RBP10.26□□□□□ -0.77
CDH1-206ENST00000564676 ARL13BQ3SXY8 428 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 CCDC14Q49A88 953 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 FNDC3BQ53EP0 1204 aaKnown RBP10.26□□□□□ -0.77
CDH1-206ENST00000564676 TTC39BQ5VTQ0 682 aaPredicted RBP10.26□□□□□ -0.77
CDH1-206ENST00000564676 RNF43Q68DV7 783 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 KIAA1211LQ6NV74 962 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 WDR59Q6PJI9 974 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 SERPINA13PQ6UXR4 307 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 LRRC31Q6UY01 552 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 C14orf80Q86SX3 495 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 ADIPOR2Q86V24 386 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 VPS36Q86VN1 386 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 RASSF3Q86WH2 238 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 CIR1Q86X95 450 aaPredicted RBP10.26□□□□□ -0.77
CDH1-206ENST00000564676 FAM131BQ86XD5 332 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 MDGA1Q8NFP4 955 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 SYN2Q92777 582 aaPredicted RBP10.26□□□□□ -0.77
CDH1-206ENST00000564676 IGSF8Q969P0 613 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 VCPIP1Q96JH7 1222 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 GMEB2Q9UKD1 530 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 INVSQ9Y283 1065 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 SNX10Q9Y5X0 201 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 SPAG17Q6Q759 2223 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 PIEZO1Q92508 2521 aa10.26□□□□□ -0.77
CDH1-206ENST00000564676 ABCA7Q8IZY2 2146 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 A0A1W2PQF6 199 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 DCLK1O15075 740 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 SRGAP2O75044 1071 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 ENDOD1O94919 500 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 GYPCP04921 128 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 SERPING1P05155 500 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 TPM1P09493 284 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 DLDP09622 509 aaKnown RBP10.25□□□□□ -0.77
CDH1-206ENST00000564676 CASP14P31944 242 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 CSKP41240 450 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms