RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 DHPSP49366 369 aaPredicted RBP18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 CCDC6Q16204 474 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 BRMS1LQ5PSV4 323 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 TTC39BQ5VTQ0 682 aaPredicted RBP18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 SLC36A4Q6YBV0 504 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 PRR23CQ6ZRP0 262 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 TMEFF1Q8IYR6 380 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 NT5C3BQ969T7 300 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 PGAP3Q96FM1 320 aaPredicted RBP18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 RPRD1AQ96P16 312 aaPredicted RBP18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 TBCBQ99426 244 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 AGPAT1Q99943 283 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 C11orf70Q9BRQ4 267 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 TKTL2Q9H0I9 626 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 SIK2Q9H0K1 926 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 SLC6A17Q9H1V8 727 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 PRDM16Q9HAZ2 1276 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 CBX8Q9HC52 389 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 METTL5Q9NRN9 209 aaKnown RBP18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 PIGVQ9NUD9 493 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 MBD1Q9UIS9 605 aaPredicted RBP18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 TMEM59LQ9UK28 342 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 NUP205Q92621 2012 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 SDK1Q7Z5N4 2213 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 ZNF292O60281 2723 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 PAGE1O75459 146 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 CAVIN2O95810 425 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 ZNF806P0C7X5 589 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 TFE3P19532 575 aaPredicted RBP18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 SDHBP21912 280 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 FLT3P36888 993 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 CXCR3P49682 368 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 ST8SIA6P61647 398 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 AUHQ13825 339 aaKnown RBP18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 FSCBQ5H9T9 825 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 FBXL22Q6P050 247 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 ARCQ7LC44 396 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 PHLDB2Q86SQ0 1253 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 LUZP1Q86V48 1076 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 TMPRSS6Q8IU80 811 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 C12orf50Q8NA57 414 aaPredicted RBP18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 TTC17Q96AE7 1141 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 LMLNQ96KR4 655 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 CFAP57Q96MR6 1250 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 PCDHB18PQ96TA0 734 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 TMEM245Q9H330 911 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 VPS45Q9NRW7 570 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 ARHGEF38Q9NXL2 777 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 ADAM22Q9P0K1 906 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 VANGL2Q9ULK5 521 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 HS3ST4Q9Y661 456 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 CKAP5Q14008 2032 aa18.95■□□□□ 0.62
SYNGR3-204ENST00000564642 KMT2BQ9UMN6 2715 aaPredicted RBP18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 A0A1B0GTH6 734 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 A0A1B0GVM2 712 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 A0A1W2PQC6 194 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 BCLAF3A2AJT9 711 aaKnown RBP18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 TCAF2A6NFQ2 919 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 GOLGA6L19H0YKK7 550 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 AP5Z1O43299 807 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 ADCY5O95622 1261 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 ASLP04424 464 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 HLA-EP13747 358 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 CSKP41240 450 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 RPL6Q02878 288 aaKnown RBP18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 SLC12A1Q13621 1099 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 PTPRNQ16849 979 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 RSPO4Q2I0M5 234 aaPredicted RBP18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 CLEC16AQ2KHT3 1053 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 PITRM1Q5JRX3 1037 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 SPDYCQ5MJ68 293 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 PLA2G2CQ5R387 149 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 OTUD1Q5VV17 481 aaPredicted RBP18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 CYP2U1Q7Z449 544 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 CCAR2Q8N163 923 aaKnown RBP18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 PRCCQ92733 491 aaPredicted RBP18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 RMDN1Q96DB5 314 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 SIPA1Q96FS4 1042 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 NAP1L5Q96NT1 182 aaPredicted RBP18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 ADAM33Q9BZ11 813 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 SUN2Q9UH99 717 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 INTS6Q9UL03 887 aaKnown RBP18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 MYO6Q9UM54 1294 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 CYP8B1Q9UNU6 501 aa18.94■□□□□ 0.62
SYNGR3-204ENST00000564642 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 IGHV1OR15-9A0A0B4J2B8 117 aa18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 NDUFS2O75306 463 aa18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 CALB1P05937 261 aa18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 ACADMP11310 421 aa18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 PDGFRAP16234 1089 aa18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 TNFAIP3P21580 790 aa18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 RDXP35241 583 aaKnown RBP18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 OXCT1P55809 520 aa18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 CENPCQ03188 943 aa18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 ZNF177Q13360 481 aaPredicted RBP18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 SF3A2Q15428 464 aaKnown RBP18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 ZSCAN23Q3MJ62 389 aa18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 AASDHQ4L235 1098 aaPredicted RBP18.93■□□□□ 0.62
SYNGR3-204ENST00000564642 ACBD5Q5T8D3 534 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms