RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 PDPK2PQ6A1A2 396 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 IQSEC1Q6DN90 963 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 PACS1Q6VY07 963 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 PRUNE1Q86TP1 453 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 ULK2Q8IYT8 1036 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 UNC5BQ8IZJ1 945 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 PQLC3Q8N755 202 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 LINC01465Q8N7H1 131 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 CCNYQ8ND76 341 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 ICA1LQ8NDH6 482 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 GPRC5AQ8NFJ5 357 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 CXorf38Q8TB03 319 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 CALML6Q8TD86 181 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 ACTRT2Q8TDY3 377 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 PDCD6IPQ8WUM4 868 aaKnown RBP7.83□□□□□ -1.16
ATXN3-249ENST00000564606 ISL2Q96A47 359 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 CERS2Q96G23 380 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 SNX27Q96L92 541 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 RTKNQ9BST9 563 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 THTPAQ9BU02 230 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 KATNAL1Q9BW62 490 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 UBE2OQ9C0C9 1292 aaKnown RBP7.83□□□□□ -1.16
ATXN3-249ENST00000564606 KLHL4Q9C0H6 718 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 NMUR2Q9GZQ4 415 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 KCNK13Q9HB14 408 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 EML4Q9HC35 981 aaKnown RBP7.83□□□□□ -1.16
ATXN3-249ENST00000564606 XPNPEP3Q9NQH7 507 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 PFDN4Q9NQP4 134 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 NMRK1Q9NWW6 199 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 DDX43Q9NXZ2 648 aaKnown RBP7.83□□□□□ -1.16
ATXN3-249ENST00000564606 BTBD7Q9P203 1132 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 FNIP2Q9P278 1114 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 KLHL8Q9P2G9 620 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-249ENST00000564606 SAE1Q9UBE0 346 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-249ENST00000564606 CYTH4Q9UIA0 394 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 WDR81Q562E7 1941 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 ZNFX1Q9P2E3 1918 aaKnown RBP7.82□□□□□ -1.16
ATXN3-249ENST00000564606 FAM237BA0A1B0GVD1 139 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 SMIM31A0A1B0GVY4 71 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 TCRBV7S3A2A0A539 114 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 A8MUI8 341 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 C9IYK1 514 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 CFAP99D6REC4 459 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 H3BRB1 525 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 EEF2KO00418 725 aaKnown RBP7.82□□□□□ -1.16
ATXN3-249ENST00000564606 TNPO2O14787 897 aaKnown RBP7.82□□□□□ -1.16
ATXN3-249ENST00000564606 TSPAN1O60635 241 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 ENTPD5O75356 428 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 ITGA2BP08514 1039 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 ANPEPP15144 967 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 KCNE1P15382 129 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 WARSP23381 471 aaKnown RBP7.82□□□□□ -1.16
ATXN3-249ENST00000564606 PAPOLAP51003 745 aaKnown RBP7.82□□□□□ -1.16
ATXN3-249ENST00000564606 ALDH18A1P54886 795 aaKnown RBP7.82□□□□□ -1.16
ATXN3-249ENST00000564606 HDAC4P56524 1084 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 GJA9P57773 515 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 SESN3P58005 492 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 KDSRQ06136 332 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 NIPAL4Q0D2K0 466 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 SCAPQ12770 1279 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 CDH17Q12864 832 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 PRKAA1Q13131 559 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 MMRN1Q13201 1228 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 DGKZQ13574 1117 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 C15orf59Q2T9L4 293 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-249ENST00000564606 ANKRD20A4Q4UJ75 823 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 KHDC1Q4VXA5 237 aaKnown RBP7.82□□□□□ -1.16
ATXN3-249ENST00000564606 TEX44Q53QW1 395 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 ACSBG2Q5FVE4 666 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 PPP1R26Q5T8A7 1209 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-249ENST00000564606 N4BP2L1Q5TBK1 243 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-249ENST00000564606 AP1ARQ63HQ0 302 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 PMF1Q6P1K2 205 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 NPNTQ6UXI9 565 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 EEPD1Q7L9B9 569 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 PID1Q7Z2X4 250 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 MYLK4Q86YV6 388 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-249ENST00000564606 KIAA0319LQ8IZA0 1049 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 C7orf31Q8N865 590 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 DNAAF3Q8N9W5 541 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 ANKLE1Q8NAG6 615 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 RP9Q8TA86 221 aaKnown RBP7.82□□□□□ -1.16
ATXN3-249ENST00000564606 ZNF526Q8TF50 670 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-249ENST00000564606 DDI1Q8WTU0 396 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 RNF139Q8WU17 664 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 IRGQQ8WZA9 623 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 WNT8BQ93098 351 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 ELMO3Q96BJ8 720 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 FAM149B1Q96BN6 582 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 PGBD4Q96DM1 585 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 TSPAN17Q96FV3 270 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 CLMNQ96JQ2 1002 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 FGD4Q96M96 766 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 PEBP4Q96S96 227 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 KLF6Q99612 283 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-249ENST00000564606 HNRNPABQ99729 332 aaKnown RBP7.82□□□□□ -1.16
ATXN3-249ENST00000564606 EFHD1Q9BUP0 239 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 CCDC106Q9BWC9 280 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 DUSP16Q9BY84 665 aa7.82□□□□□ -1.16
ATXN3-249ENST00000564606 PRKD2Q9BZL6 878 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms