RNA–Protein interactions for RNA: ENST00000564286.1

CFDP1-203, Transcript of craniofacial development protein 1, humanhuman

TSL 5

Gene CFDP1, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-203ENST00000564286 K7ELQ4 463 aaPredicted RBP11.13□□□□□ -0.63
CFDP1-203ENST00000564286 XPO1O14980 1071 aaKnown RBP11.13□□□□□ -0.63
CFDP1-203ENST00000564286 TBL1XO60907 577 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 ZIC2O95409 532 aaPredicted RBP11.13□□□□□ -0.63
CFDP1-203ENST00000564286 ASLP04424 464 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 CD38P28907 300 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 EIF2S3P41091 472 aaKnown RBP11.13□□□□□ -0.63
CFDP1-203ENST00000564286 RAD23BP54727 409 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 PPP3CAQ08209 521 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 KCNT1Q5JUK3 1230 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 MPP7Q5T2T1 576 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 BSPRYQ5W0U4 402 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 ATL3Q6DD88 541 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 KIAA0907Q7Z7F0 614 aaPredicted RBP11.13□□□□□ -0.63
CFDP1-203ENST00000564286 GATAD2AQ86YP4 633 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 SLC4A11Q8NBS3 891 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 LSM14AQ8ND56 463 aaKnown RBP11.13□□□□□ -0.63
CFDP1-203ENST00000564286 OR2T34Q8NGX1 318 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 EDEM1Q92611 657 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 COL26A1Q96A83 441 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 SLC6A18Q96N87 628 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 DDX50Q9BQ39 737 aaKnown RBP11.13□□□□□ -0.63
CFDP1-203ENST00000564286 IRX2Q9BZI1 471 aaPredicted RBP11.13□□□□□ -0.63
CFDP1-203ENST00000564286 RSPH9Q9H1X1 276 aaPredicted RBP11.13□□□□□ -0.63
CFDP1-203ENST00000564286 PABPC3Q9H361 631 aaKnown RBP11.13□□□□□ -0.63
CFDP1-203ENST00000564286 RAB20Q9NX57 234 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 SFMBT1Q9UHJ3 866 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 USP25Q9UHP3 1055 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 STOML2Q9UJZ1 356 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 TPX2Q9ULW0 747 aaKnown RBP11.13□□□□□ -0.63
CFDP1-203ENST00000564286 LOC400499M0QZD8 3231 aa11.13□□□□□ -0.63
CFDP1-203ENST00000564286 PLXNB3Q9ULL4 1909 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 ATXN7O15265 892 aaPredicted RBP11.12□□□□□ -0.63
CFDP1-203ENST00000564286 IRAK2O43187 625 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 RNASEH2AO75792 299 aaKnown RBP11.12□□□□□ -0.63
CFDP1-203ENST00000564286 IGHV4-34P06331 123 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 ITPKBP27987 946 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 GALCP54803 685 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 COPS2P61201 443 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 YWHAEP62258 255 aaKnown RBP11.12□□□□□ -0.63
CFDP1-203ENST00000564286 ADIGQ0VDE8 80 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 BST2Q10589 180 aaKnown RBP11.12□□□□□ -0.63
CFDP1-203ENST00000564286 TARDBPQ13148 414 aaKnown RBP eCLIP11.12□□□□□ -0.63
CFDP1-203ENST00000564286 ADAM9Q13443 819 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 NFIL3Q16649 462 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 GOLGA7BQ2TAP0 167 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 SGO2Q562F6 1265 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 PRAMEF14Q5SWL7 426 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 NUGGCQ68CJ6 796 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 NCEH1Q6PIU2 408 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 MFN1Q8IWA4 741 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 EID2Q8N6I1 236 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 FBXL13Q8NEE6 735 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 NDRG1Q92597 394 aaKnown RBP11.12□□□□□ -0.63
CFDP1-203ENST00000564286 FCRL3Q96P31 734 aaPredicted RBP11.12□□□□□ -0.63
CFDP1-203ENST00000564286 NRSN2Q9GZP1 204 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 STIM2Q9P246 746 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 CEP83Q9Y592 693 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 IGSF10Q6WRI0 2623 aa11.12□□□□□ -0.63
CFDP1-203ENST00000564286 A0A1W2PP55 124 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 CAPN8A6NHC0 703 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 YJEFN3A6XGL0 299 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 E7ENQ6 273 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 MID1O15344 667 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 MSI1O43347 362 aaKnown RBP11.11□□□□□ -0.63
CFDP1-203ENST00000564286 ACTN4O43707 911 aaKnown RBP11.11□□□□□ -0.63
CFDP1-203ENST00000564286 SIN3BO75182 1162 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 MOCS3O95396 460 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 PRB1P04280 392 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 HSP90AA1P07900 732 aaKnown RBP11.11□□□□□ -0.63
CFDP1-203ENST00000564286 CD19P15391 556 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 CD70P32970 193 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 MXI1P50539 228 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 DNAJC3Q13217 504 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 ILKQ13418 452 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 CST6Q15828 149 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 HNRNPA1L2Q32P51 320 aaKnown RBP11.11□□□□□ -0.63
CFDP1-203ENST00000564286 HES3Q5TGS1 186 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 PIK3R6Q5UE93 754 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 RNF219Q5W0B1 726 aaPredicted RBP11.11□□□□□ -0.63
CFDP1-203ENST00000564286 RFWD3Q6PCD5 774 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 ZNF605Q86T29 641 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 DHX40Q8IX18 779 aaKnown RBP11.11□□□□□ -0.63
CFDP1-203ENST00000564286 OXR1Q8N573 874 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 KDM1BQ8NB78 822 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 FIBINQ8TAL6 211 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 SAP25Q8TEE9 199 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 TTC17Q96AE7 1141 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 SERAC1Q96JX3 654 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 NEUROG2Q9H2A3 272 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 PRORYQ9H606 182 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 CNGB3Q9NQW8 809 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 TSPAN16Q9UKR8 245 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 KIAA1257Q9ULG3 409 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 FZD4Q9ULV1 537 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 MAPK8IP1Q9UQF2 711 aa11.11□□□□□ -0.63
CFDP1-203ENST00000564286 GCN1Q92616 2671 aaKnown RBP11.1□□□□□ -0.63
CFDP1-203ENST00000564286 TBC1D3DA0A087WVF3 549 aa11.1□□□□□ -0.63
CFDP1-203ENST00000564286 TBC1D3IA0A087WXS9 549 aa11.1□□□□□ -0.63
CFDP1-203ENST00000564286 TBC1D3EA0A087X179 549 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms