RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 NRG2O14511 850 aaPredicted RBP13.2□□□□□ -0.3
CLK3-214ENST00000564096 DCLK1O15075 740 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 NCAM2O15394 837 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 MFSD11O43934 449 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 GAS8O95995 478 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 KLKB1P03952 638 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 AMPD1P23109 780 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 GBP2P32456 591 aaPredicted RBP13.2□□□□□ -0.3
CLK3-214ENST00000564096 CDH4P55283 916 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 OTUD4Q01804 1114 aaKnown RBP13.2□□□□□ -0.3
CLK3-214ENST00000564096 PAFAH1B3Q15102 231 aaKnown RBP13.2□□□□□ -0.3
CLK3-214ENST00000564096 NOMO1Q15155 1222 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 CCNG2Q16589 344 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 CHST9Q7L1S5 443 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 KLHL7Q8IXQ5 586 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 FAM217AQ8IXS0 508 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 PRELID2Q8N945 189 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 ZNF557Q8N988 423 aaPredicted RBP13.2□□□□□ -0.3
CLK3-214ENST00000564096 CCDC26Q8TAB7 109 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 ACTL9Q8TC94 416 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 MYLIPQ8WY64 445 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 MSLNLQ96KJ4 702 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 CCDC114Q96M63 670 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 ASB16Q96NS5 453 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 S1PR5Q9H228 398 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 LRRC19Q9H756 370 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 FEZ2Q9UHY8 353 aaPredicted RBP13.2□□□□□ -0.3
CLK3-214ENST00000564096 NEU3Q9UQ49 428 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 HEY1Q9Y5J3 304 aa13.2□□□□□ -0.3
CLK3-214ENST00000564096 TCRBV7S2A1N4TA0A589 114 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 CFAP69A5D8W1 941 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 WASH4PA8MWX3 477 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 LIASO43766 372 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 CLDN11O75508 207 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 ECEL1O95672 775 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 SLC6A4P31645 630 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 VCPP55072 806 aaKnown RBP13.19□□□□□ -0.3
CLK3-214ENST00000564096 DLX2Q07687 328 aaPredicted RBP13.19□□□□□ -0.3
CLK3-214ENST00000564096 SMAD4Q13485 552 aaKnown RBP13.19□□□□□ -0.3
CLK3-214ENST00000564096 BYSLQ13895 437 aaKnown RBP13.19□□□□□ -0.3
CLK3-214ENST00000564096 DHX34Q14147 1143 aaKnown RBP13.19□□□□□ -0.3
CLK3-214ENST00000564096 CBX2Q14781 532 aaPredicted RBP13.19□□□□□ -0.3
CLK3-214ENST00000564096 PDK1Q15118 436 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 SIX1Q15475 284 aaPredicted RBP13.19□□□□□ -0.3
CLK3-214ENST00000564096 C5orf22Q49AR2 442 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 MPPE1Q53F39 396 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 C6orf118Q5T5N4 469 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 DRICH1Q6PGQ1 229 aaPredicted RBP13.19□□□□□ -0.3
CLK3-214ENST00000564096 C1orf228Q6PIY5 440 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 MTSS1LQ765P7 747 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 OTOP3Q7RTS5 596 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 BBS7Q8IWZ6 715 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 CCDC105Q8IYK2 499 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 ZNF683Q8IZ20 524 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 DEFB123Q8N688 67 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 TDRD5Q8NAT2 981 aaKnown RBP13.19□□□□□ -0.3
CLK3-214ENST00000564096 ADAMTS19Q8TE59 1207 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 NKD2Q969F2 451 aaPredicted RBP13.19□□□□□ -0.3
CLK3-214ENST00000564096 PRICKLE1Q96MT3 831 aaPredicted RBP13.19□□□□□ -0.3
CLK3-214ENST00000564096 CDX2Q99626 313 aaPredicted RBP13.19□□□□□ -0.3
CLK3-214ENST00000564096 HERPUD2Q9BSE4 406 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 BRD8Q9H0E9 1235 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 UBE2ZQ9H832 354 aaPredicted RBP13.19□□□□□ -0.3
CLK3-214ENST00000564096 TRPV4Q9HBA0 871 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 TMEM248Q9NWD8 314 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 THG1LQ9NWX6 298 aaKnown RBP13.19□□□□□ -0.3
CLK3-214ENST00000564096 CCL26Q9Y258 94 aa13.19□□□□□ -0.3
CLK3-214ENST00000564096 ANAPC1Q9H1A4 1944 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 GOLGA6L7A0A1B0GV03 622 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 DRGXA6NNA5 263 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 HACD1B0YJ81 288 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 GREM1O60565 184 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 PECAM1P16284 738 aaPredicted RBP13.18□□□□□ -0.3
CLK3-214ENST00000564096 LTBRP36941 435 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 ETFBP38117 255 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 IFNAR2P48551 515 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 EIF3EP60228 445 aaKnown RBP13.18□□□□□ -0.3
CLK3-214ENST00000564096 DR1Q01658 176 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 GBE1Q04446 702 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 ADCY2Q08462 1091 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 XRCC4Q13426 336 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 CDH18Q13634 790 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 GLE1Q53GS7 698 aaKnown RBP13.18□□□□□ -0.3
CLK3-214ENST00000564096 FAM78AQ5JUQ0 283 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 TEX35Q5T0J7 233 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 MPP7Q5T2T1 576 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 RFWD3Q6PCD5 774 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 CCDC137Q6PK04 289 aaKnown RBP13.18□□□□□ -0.3
CLK3-214ENST00000564096 SYDE1Q6ZW31 735 aaPredicted RBP13.18□□□□□ -0.3
CLK3-214ENST00000564096 MAATS1Q7Z4T9 603 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 TFAP2DQ7Z6R9 452 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 C14orf80Q86SX3 495 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 NLRP14Q86W24 1093 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 LRRC49Q8IUZ0 686 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 MMGT1Q8N4V1 131 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 ATPAF2Q8N5M1 289 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 CCHCR1Q8TD31 782 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 BPIFB1Q8TDL5 484 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 C1orf54Q8WWF1 131 aa13.18□□□□□ -0.3
CLK3-214ENST00000564096 ATG4AQ8WYN0 398 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms