RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 HDAC3O15379 428 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 BIRC5O15392 142 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 MAGEB2O15479 319 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 UGT1A9O60656 530 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 MYCP01106 439 aaPredicted RBP12.89□□□□□ -0.35
COMMD4-209ENST00000564068 GABRB2P47870 512 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 NDST1P52848 882 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 PSME3P61289 254 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 XIAPP98170 497 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 CACNB2Q08289 660 aaPredicted RBP12.89□□□□□ -0.35
COMMD4-209ENST00000564068 TMEM62Q0P6H9 643 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 POU6F1Q14863 301 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 CYP51A1Q16850 503 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 AASDHQ4L235 1098 aaPredicted RBP12.89□□□□□ -0.35
COMMD4-209ENST00000564068 EFCAB12Q6NXP0 572 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 CHSY1Q86X52 802 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 TNIP2Q8NFZ5 429 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 UTP4Q969X6 686 aaKnown RBP12.89□□□□□ -0.35
COMMD4-209ENST00000564068 DGCR6LQ9BY27 220 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 MAGEB5Q9BZ81 275 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 UBE2OQ9C0C9 1292 aaKnown RBP12.89□□□□□ -0.35
COMMD4-209ENST00000564068 UGT1A7Q9HAW7 530 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 UGT1A10Q9HAW8 530 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 UGT1A8Q9HAW9 530 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 GPRC5DQ9NZD1 345 aa12.89□□□□□ -0.35
COMMD4-209ENST00000564068 MRPL42Q9Y6G3 142 aaKnown RBP12.89□□□□□ -0.35
COMMD4-209ENST00000564068 CFAP99D6REC4 459 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 LRCH4O75427 683 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 CFHP08603 1231 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 GNAZP19086 355 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 NFYCQ13952 458 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 SAMD7Q7Z3H4 446 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 MAGEE2Q8TD90 523 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-209ENST00000564068 RUBCNLQ9H714 662 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 RMI1Q9H9A7 625 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 PXMP2Q9NR77 195 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 WRAP73Q9P2S5 460 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-209ENST00000564068 ATP6AP2A0A1C7CYW4 349 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 ATP6AP2O75787 350 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 SUPT20HL2P0C7V6 817 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 PGAM1P18669 254 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 ATP6V1B2P21281 511 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 CA8P35219 290 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 GPX6P59796 221 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 SPIRE1Q08AE8 756 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 NADK2Q4G0N4 442 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 MSS51Q4VC12 460 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 MTX3Q5HYI7 312 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 TRMT10BQ6PF06 316 aaKnown RBP12.88□□□□□ -0.35
COMMD4-209ENST00000564068 FRA10AC1Q70Z53 315 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 KCNMB4Q86W47 210 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 BBS5Q8N3I7 341 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 SPATA6LQ8N4H0 392 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 PABPC5Q96DU9 382 aaKnown RBP12.88□□□□□ -0.35
COMMD4-209ENST00000564068 IFT43Q96FT9 208 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 MFSD14AQ96MC6 490 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 ZNF180Q9UJW8 692 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 UNGP13051 313 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-209ENST00000564068 CAP2P40123 477 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 TNFSF9P41273 254 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 PRKD1Q15139 912 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-209ENST00000564068 IMPG1Q17R60 797 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 ZIK1Q3SY52 487 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-209ENST00000564068 PTPN20Q4JDL3 420 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 ZNF618Q5T7W0 954 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 GRTP1Q5TC63 336 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 C12orf56Q8IXR9 622 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 DAW1Q8N136 415 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 SHCBP1Q8NEM2 672 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 OR52K1Q8NGK4 314 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 TNIP3Q96KP6 325 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 EIF2AQ9BY44 585 aaKnown RBP12.88□□□□□ -0.35
COMMD4-209ENST00000564068 NOL11Q9H8H0 719 aaKnown RBP12.88□□□□□ -0.35
COMMD4-209ENST00000564068 CAB39LQ9H9S4 337 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 MRGBPQ9NV56 204 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 ITGA11Q9UKX5 1188 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 NOD1Q9Y239 953 aa12.88□□□□□ -0.35
COMMD4-209ENST00000564068 AP3B1O00203 1094 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 H2AFYO75367 372 aaKnown RBP12.87□□□□□ -0.35
COMMD4-209ENST00000564068 IL18RAPO95256 599 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 TRUB2O95900 331 aaKnown RBP12.87□□□□□ -0.35
COMMD4-209ENST00000564068 TSHRP16473 764 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 GM2AP17900 193 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 TCF7P36402 384 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-209ENST00000564068 NR1D2Q14995 579 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 SFT2D3Q587I9 215 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 AGAP9Q5VTM2 703 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 STK32CQ86UX6 486 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 TREML1Q86YW5 311 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 BRSK2Q8IWQ3 736 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 MICALL2Q8IY33 904 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 ARL10Q8N8L6 244 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 ULK4Q96C45 1275 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 THUMPD3Q9BV44 507 aaKnown RBP12.87□□□□□ -0.35
COMMD4-209ENST00000564068 ASTN2O75129 1339 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-209ENST00000564068 VAPBO95292 243 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 GRIA4P48058 902 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 YWHAZP63104 245 aaKnown RBP12.87□□□□□ -0.35
COMMD4-209ENST00000564068 DSELQ8IZU8 1212 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 ATXN3LQ9H3M9 355 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms