RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 SLCO2A1Q92959 643 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 NKD2Q969F2 451 aaPredicted RBP10.48□□□□□ -0.73
SMG1-208ENST00000563448 RUNDC3BQ96NL0 473 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 PNKPQ96T60 521 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 TRIM51Q9BSJ1 452 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 APOL5Q9BWW9 433 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 KLC2Q9H0B6 622 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 SMG9Q9H0W8 520 aaKnown RBP10.48□□□□□ -0.73
SMG1-208ENST00000563448 TASP1Q9H6P5 420 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 C10orf88Q9H8K7 445 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 DTLQ9NZJ0 730 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 MPP6Q9NZW5 540 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 PPARGC1AQ9UBK2 798 aaKnown RBP10.48□□□□□ -0.73
SMG1-208ENST00000563448 CLUHO75153 1309 aa10.48□□□□□ -0.73
SMG1-208ENST00000563448 ZSCAN5CA6NGD5 496 aaPredicted RBP10.47□□□□□ -0.73
SMG1-208ENST00000563448 SOBPA7XYQ1 873 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 WASH4PA8MWX3 477 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 ZNF197O14709 1029 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 FGF10O15520 208 aaPredicted RBP10.47□□□□□ -0.73
SMG1-208ENST00000563448 CNTN5O94779 1100 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 HEXIM1O94992 359 aaKnown RBP10.47□□□□□ -0.73
SMG1-208ENST00000563448 RBP3P10745 1247 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 NR2C2P49116 596 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 ALFQ53S48 1182 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 ACBD5Q5T8D3 534 aaPredicted RBP10.47□□□□□ -0.73
SMG1-208ENST00000563448 CCDC70Q6NSX1 233 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 RFWD3Q6PCD5 774 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 SYCE2Q6PIF2 218 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 TMCO3Q6UWJ1 677 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 LRRC31Q6UY01 552 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 Q6ZNB5 142 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 MAATS1Q7Z4T9 603 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 JAMLQ86YT9 394 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 TP53INP2Q8IXH6 220 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 CCDC33Q8N5R6 958 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 LRRN4Q8WUT4 740 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 ING5Q8WYH8 240 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 CCDC114Q96M63 670 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 OLFM3Q96PB7 478 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 ZYG11BQ9C0D3 744 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 CATSPERBQ9H7T0 1116 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 NDFIP2Q9NV92 336 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 CDH22Q9UJ99 828 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 STOML2Q9UJZ1 356 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 ARHGAP26Q9UNA1 814 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 ZNF148Q9UQR1 794 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 MRPS23Q9Y3D9 190 aaKnown RBP10.47□□□□□ -0.73
SMG1-208ENST00000563448 NEU2Q9Y3R4 380 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 MTCH2Q9Y6C9 303 aa10.47□□□□□ -0.73
SMG1-208ENST00000563448 TMEM265A0A087WTH1 108 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 TARSL2A2RTX5 802 aaKnown RBP10.46□□□□□ -0.73
SMG1-208ENST00000563448 FAM187AA6NFU0 413 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 F5H5T6 163 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 LEFTY2O00292 366 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 SOX1O00570 391 aaPredicted RBP10.46□□□□□ -0.73
SMG1-208ENST00000563448 SCAMP3O14828 347 aaKnown RBP10.46□□□□□ -0.73
SMG1-208ENST00000563448 MCF2LO15068 1137 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 LATS1O95835 1130 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 ITGAVP06756 1048 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 SLC11A2P49281 568 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 ADGRE1Q14246 886 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 GPR149Q86SP6 731 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 PRUNE1Q86TP1 453 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 NLRP14Q86W24 1093 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 LGI2Q8N0V4 545 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 ALLCQ8N6M5 410 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 GRK7Q8WTQ7 553 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 ZSWIM3Q96MP5 696 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 TMEM121Q9BTD3 319 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 CCL26Q9Y258 94 aa10.46□□□□□ -0.73
SMG1-208ENST00000563448 H7C0C1 242 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 ECEL1O95672 775 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 RHOQP17081 205 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 AVPR1AP37288 418 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 ATP5OP48047 213 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 SGSHP51688 502 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 GDF10P55107 478 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 GUCY2DQ02846 1103 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 XRCC4Q13426 336 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 TRADDQ15628 312 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 ADGRF1Q5T601 910 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 DARS2Q6PI48 645 aaKnown RBP10.46□□□□□ -0.74
SMG1-208ENST00000563448 HTR3DQ70Z44 454 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 BZW1Q7L1Q6 419 aaKnown RBP10.46□□□□□ -0.74
SMG1-208ENST00000563448 FAM217AQ8IXS0 508 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 RTL3Q8N8U3 475 aaKnown RBP10.46□□□□□ -0.74
SMG1-208ENST00000563448 GLIS1Q8NBF1 620 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 RIN3Q8TB24 985 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 USP13Q92995 863 aaPredicted RBP10.46□□□□□ -0.74
SMG1-208ENST00000563448 PRICKLE1Q96MT3 831 aaPredicted RBP10.46□□□□□ -0.74
SMG1-208ENST00000563448 RPRD1AQ96P16 312 aaPredicted RBP10.46□□□□□ -0.74
SMG1-208ENST00000563448 PARD6BQ9BYG5 372 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 EPB41L5Q9HCM4 733 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 GDF3Q9NR23 364 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 TMEM248Q9NWD8 314 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 CLEC1BQ9P126 229 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 CFAP97Q9P2B7 532 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 ZNF212Q9UDV6 495 aa10.46□□□□□ -0.74
SMG1-208ENST00000563448 FEZ2Q9UHY8 353 aaPredicted RBP10.46□□□□□ -0.74
SMG1-208ENST00000563448 SH3BP1Q9Y3L3 701 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms