RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ZBED2Q9BTP6 218 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 ZSCAN5AQ9BUG6 496 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 CARD6Q9BX69 1037 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 ACE2Q9BYF1 805 aaPredicted RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 API5Q9BZZ5 524 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 PABPC3Q9H361 631 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 EPB41L5Q9HCM4 733 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 GMIPQ9P107 970 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 SEPT9Q9UHD8 586 aaPredicted RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 GPN3Q9UHW5 284 aaPredicted RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 NPHP4O75161 1426 aaPredicted RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 A0A088AWK7 358 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 TMEM221A6NGB7 291 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 OR6C76A6NM76 312 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 RNF40O75150 1001 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 DLGAP3O95886 979 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 PFKMP08237 780 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 RALAP11233 206 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 BMP1P13497 986 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 PTAFRP25105 342 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 PCSK1P29120 753 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 NUP62P37198 522 aaPredicted RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 RANBP1P43487 201 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 SSTP61278 116 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 HERVK_113P62684 666 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 ERVK-24P63145 666 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 SPIRE1Q08AE8 756 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 FSTL1Q12841 308 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 PTK6Q13882 451 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 CCINQ13939 588 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 ARHGAP19Q14CB8 494 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 TRIM71Q2Q1W2 868 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 FIGNQ5HY92 759 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 FAM69AQ5T7M9 428 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 LIN9Q5TKA1 542 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 CACHD1Q5VU97 1274 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 DCAF15Q66K64 600 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 TRIM72Q6ZMU5 477 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 CATSPERGQ6ZRH7 1159 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 BBS12Q6ZW61 710 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 ZNF598Q86UK7 904 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 KBTBD6Q86V97 674 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 TPRA1Q86W33 373 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 SRRM1Q8IYB3 904 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 ZNF679Q8IYX0 411 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 MARCH10Q8NA82 808 aaPredicted RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 POGLUT1Q8NBL1 392 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 PIK3C3Q8NEB9 887 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 SCFD2Q8WU76 684 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 LIPHQ8WWY8 451 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 KAT2BQ92831 832 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 DDX17Q92841 729 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 HSH2DQ96JZ2 352 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 USP28Q96RU2 1077 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 MNTQ99583 582 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 WNT8AQ9H1J5 351 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 CABP5Q9NP86 173 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 PRDM6Q9NQX0 595 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 FARSBQ9NSD9 589 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 CFAP97Q9P2B7 532 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 KLHL14Q9P2G3 628 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 LPAR3Q9UBY5 353 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 REV1Q9UBZ9 1251 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 LIPT1Q9Y234 373 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 RUVBL1Q9Y265 456 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 UNC13BO14795 1591 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 BCL9LQ86UU0 1499 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 EIF3AQ14152 1382 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 SPHKAPQ2M3C7 1700 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 BLMP54132 1417 aaPredicted RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 LOC105371267A0A1B0GV96 52 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 CCDC154A6NI56 674 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 MYO1FO00160 1098 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 FCHO1O14526 889 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 TNPO2O14787 897 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 CASC3O15234 703 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 CLDN3O15551 220 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 CBR3O75828 277 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 ECDO95905 644 aaPredicted RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 ONECUT2O95948 504 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 F9P00740 461 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 CYP1A1P04798 512 aaPredicted RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 ANPEPP15144 967 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 CHN1P15882 459 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 DDX5P17844 614 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 PDE1AP54750 535 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 GIT2Q14161 759 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 GPR68Q15743 365 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 CEBPEQ15744 281 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 PLA1AQ53H76 456 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 ARSJQ5FYB0 599 aaPredicted RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 INTS6LQ5JSJ4 861 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 DEPDC1Q5TB30 811 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 MFSD7Q6UXD7 560 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 SLC36A4Q6YBV0 504 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 USP53Q70EK8 1073 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 VASH2Q86V25 355 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 CCNJLQ8IV13 435 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 C12orf56Q8IXR9 622 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 OXR1Q8N573 874 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms