RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 BANPQ8N9N5 519 aa19.64■□□□□ 0.74
SMPD3-203ENST00000563226 GSDMBQ8TAX9 411 aa19.64■□□□□ 0.74
SMPD3-203ENST00000563226 GPR62Q9BZJ7 368 aa19.64■□□□□ 0.74
SMPD3-203ENST00000563226 EIF2B3Q9NR50 452 aaKnown RBP19.64■□□□□ 0.74
SMPD3-203ENST00000563226 KLHL8Q9P2G9 620 aaPredicted RBP19.64■□□□□ 0.74
SMPD3-203ENST00000563226 IGSF9Q9P2J2 1179 aa19.64■□□□□ 0.74
SMPD3-203ENST00000563226 IQANK1A0A1B0GTG1 560 aa19.64■□□□□ 0.73
SMPD3-203ENST00000563226 MGAT1P26572 445 aa19.64■□□□□ 0.73
SMPD3-203ENST00000563226 LIG3P49916 1009 aa19.64■□□□□ 0.73
SMPD3-203ENST00000563226 APLP1P51693 650 aa19.64■□□□□ 0.73
SMPD3-203ENST00000563226 SESN2P58004 480 aaPredicted RBP19.64■□□□□ 0.73
SMPD3-203ENST00000563226 ZBTB17Q13105 803 aa19.64■□□□□ 0.73
SMPD3-203ENST00000563226 ARTNQ5T4W7 220 aa19.64■□□□□ 0.73
SMPD3-203ENST00000563226 LRRC8BQ6P9F7 803 aa19.64■□□□□ 0.73
SMPD3-203ENST00000563226 LVRNQ6Q4G3 990 aa19.64■□□□□ 0.73
SMPD3-203ENST00000563226 SLC26A11Q86WA9 606 aa19.64■□□□□ 0.73
SMPD3-203ENST00000563226 CASD1Q96PB1 797 aa19.64■□□□□ 0.73
SMPD3-203ENST00000563226 FERMT1Q9BQL6 677 aa19.64■□□□□ 0.73
SMPD3-203ENST00000563226 UNC93B1Q9H1C4 597 aa19.64■□□□□ 0.73
SMPD3-203ENST00000563226 SMOC2Q9H3U7 446 aa19.64■□□□□ 0.73
SMPD3-203ENST00000563226 PCDHA11Q9Y5I1 949 aa19.64■□□□□ 0.73
SMPD3-203ENST00000563226 RAD54BQ9Y620 910 aa19.64■□□□□ 0.73
SMPD3-203ENST00000563226 TRDMT1O14717 391 aaKnown RBP19.63■□□□□ 0.73
SMPD3-203ENST00000563226 MT-ND3P03897 115 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 GARSP41250 739 aaKnown RBP19.63■□□□□ 0.73
SMPD3-203ENST00000563226 USP46P62068 366 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 CDK16Q00536 496 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 FAM171A1Q5VUB5 890 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 RWDD4Q6NW29 188 aaKnown RBP19.63■□□□□ 0.73
SMPD3-203ENST00000563226 SH2D5Q6ZV89 423 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 LRRC6Q86X45 466 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 DCP1BQ8IZD4 617 aaKnown RBP19.63■□□□□ 0.73
SMPD3-203ENST00000563226 TCP10LQ8TDR4 215 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 HDAC11Q96DB2 347 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 STAMBPL1Q96FJ0 436 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 TRIM62Q9BVG3 475 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 OSBPL2Q9H1P3 480 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 MARCH5Q9NX47 278 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 SLC17A7Q9P2U7 560 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 ADAM28Q9UKQ2 775 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 GOLGA6L7A0A1B0GV03 622 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 ZBTB24O43167 697 aaPredicted RBP19.63■□□□□ 0.73
SMPD3-203ENST00000563226 PAGE1O75459 146 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 MLNP12872 115 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 ADRA1DP25100 572 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 CD68P34810 354 aaPredicted RBP19.63■□□□□ 0.73
SMPD3-203ENST00000563226 MAP2K2P36507 400 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 PBX3P40426 434 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 SARNPP82979 210 aaKnown RBP19.63■□□□□ 0.73
SMPD3-203ENST00000563226 DNAJC3Q13217 504 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 ITIH4Q14624 930 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 CCDC121Q6ZUS5 278 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 FAM47EQ6ZV65 393 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 ABI1Q8IZP0 508 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 ATAD1Q8NBU5 361 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 GPR152Q8TDT2 470 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 ARNTL2Q8WYA1 636 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 AGAP3Q96P47 875 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 PCDHB7Q9Y5E2 793 aa19.63■□□□□ 0.73
SMPD3-203ENST00000563226 FAM159BA6NKW6 160 aa19.62■□□□□ 0.73
SMPD3-203ENST00000563226 TRIM49D1C9J1S8 452 aa19.62■□□□□ 0.73
SMPD3-203ENST00000563226 SOAT2O75908 522 aa19.62■□□□□ 0.73
SMPD3-203ENST00000563226 GSTA2P09210 222 aa19.62■□□□□ 0.73
SMPD3-203ENST00000563226 GBP2P32456 591 aaPredicted RBP19.62■□□□□ 0.73
SMPD3-203ENST00000563226 CTXN3Q4LDR2 81 aa19.62■□□□□ 0.73
SMPD3-203ENST00000563226 HHATQ5VTY9 493 aa19.62■□□□□ 0.73
SMPD3-203ENST00000563226 CASC4Q6P4E1 433 aa19.62■□□□□ 0.73
SMPD3-203ENST00000563226 CCT6BQ92526 530 aa19.62■□□□□ 0.73
SMPD3-203ENST00000563226 OXNAD1Q96HP4 312 aaPredicted RBP19.62■□□□□ 0.73
SMPD3-203ENST00000563226 ELAC1Q9H777 363 aaKnown RBP19.62■□□□□ 0.73
SMPD3-203ENST00000563226 SLC17A6Q9P2U8 582 aa19.62■□□□□ 0.73
SMPD3-203ENST00000563226 SYN3O14994 580 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 NCAM2O15394 837 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 USP12O75317 370 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 ZWINTO95229 277 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 SERPINB6P35237 376 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 SLC11A1P49279 550 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 ZNF135P52742 658 aaPredicted RBP19.61■□□□□ 0.73
SMPD3-203ENST00000563226 BFSP2Q13515 415 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 BMPR2Q13873 1038 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 PDK4Q16654 411 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 STEAP4Q687X5 459 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 ARHGAP36Q6ZRI8 547 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 ANKS4BQ8N8V4 417 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 DPF3Q92784 378 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 SLCO1B3Q9NPD5 702 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 SYBUQ9NX95 663 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 TRIM17Q9Y577 477 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 NT5C1B-RDH14C9J2C7 533 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 PYGBP11216 843 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 COL6A1P12109 1028 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 MX2P20592 715 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 ARPP19P56211 112 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 MRPL58Q14197 206 aaKnown RBP19.61■□□□□ 0.73
SMPD3-203ENST00000563226 NFE2Q16621 373 aaPredicted RBP19.61■□□□□ 0.73
SMPD3-203ENST00000563226 BRMS1LQ5PSV4 323 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 TTC39BQ5VTQ0 682 aaPredicted RBP19.61■□□□□ 0.73
SMPD3-203ENST00000563226 NUP93Q8N1F7 819 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 FUBP3Q96I24 572 aaKnown RBP eCLIP19.61■□□□□ 0.73
SMPD3-203ENST00000563226 MOCS1Q9NZB8 636 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms