RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 UNC5BQ8IZJ1 945 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 DEFB106AQ8N104 65 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 ARHGAP18Q8N392 663 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 RNF139Q8WU17 664 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 ZFAND2BQ8WV99 257 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 ZNF560Q96MR9 790 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 LGMNQ99538 433 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 SNX25Q9H3E2 840 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 DPEP3Q9H4B8 488 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 SYBUQ9NX95 663 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 TMEM216Q9P0N5 145 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 MID2Q9UJV3 735 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 PCDHB12Q9Y5F1 795 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 CDY2AQ9Y6F7 541 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 CDY1Q9Y6F8 540 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 KAT6AQ92794 2004 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 ARHGAP42A6NI28 874 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 KPNA7A9QM74 516 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 H3BRB1 525 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 PIRO00625 290 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 ZNF195O14628 629 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 BUD23O43709 281 aaKnown RBP13.42□□□□□ -0.26
USB1-207ENST00000563149 BAG2O95816 211 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 ACAT1P24752 427 aaKnown RBP13.42□□□□□ -0.26
USB1-207ENST00000563149 HK2P52789 917 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 GRIK4Q16099 956 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 FBXO47Q5MNV8 452 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 SLC30A9Q6PML9 568 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 IZUMO2Q6UXV1 221 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 LIMS2Q7Z4I7 341 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 GTF3C2Q8WUA4 911 aaPredicted RBP13.42□□□□□ -0.26
USB1-207ENST00000563149 KBTBD7Q8WVZ9 684 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 STON2Q8WXE9 905 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 NT5C3BQ969T7 300 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 DCPSQ96C86 337 aaKnown RBP13.42□□□□□ -0.26
USB1-207ENST00000563149 PGBD4Q96DM1 585 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 TNIP3Q96KP6 325 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 SLC9A7Q96T83 725 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 TTC1Q99614 292 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 RBBP8Q99708 897 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 MAGEB5Q9BZ81 275 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 TUT1Q9H6E5 874 aaKnown RBP13.42□□□□□ -0.26
USB1-207ENST00000563149 TUBGCP4Q9UGJ1 667 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 STAP1Q9ULZ2 295 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 SSX2IPQ9Y2D8 614 aa13.42□□□□□ -0.26
USB1-207ENST00000563149 POLR2AP24928 1970 aaKnown RBP13.42□□□□□ -0.26
USB1-207ENST00000563149 MAGEB16A2A368 324 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 RRN3P2A6NIE6 340 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 ERI2A8K979 691 aaKnown RBP13.41□□□□□ -0.26
USB1-207ENST00000563149 ZBTB7AO95365 584 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 LYNP07948 512 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 FAM163BP0C2L3 166 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 PSMB4P28070 264 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 AXLP30530 894 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 HOXA11P31270 313 aaPredicted RBP13.41□□□□□ -0.26
USB1-207ENST00000563149 LIMK2P53671 638 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 CSE1LP55060 971 aaKnown RBP13.41□□□□□ -0.26
USB1-207ENST00000563149 SLC25A3Q00325 362 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 ZNF792Q3KQV3 632 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 NOTUMQ6P988 496 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 DHDDSQ86SQ9 333 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 FAM131BQ86XD5 332 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 MFN1Q8IWA4 741 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 SULF1Q8IWU6 871 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 ZNF567Q8N184 647 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 PYROXD2Q8N2H3 581 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 NPY6RQ99463 290 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 SH3GL3Q99963 347 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 BRD8Q9H0E9 1235 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 SNX15Q9NRS6 342 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 PNPOQ9NVS9 261 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 MFHAS1Q9Y4C4 1052 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 RPS6KL1Q9Y6S9 549 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 MCM3APO60318 1980 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 TRIP11Q15643 1979 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 SCN1AP35498 2009 aa13.41□□□□□ -0.26
USB1-207ENST00000563149 AP3B1O00203 1094 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 NCAM2O15394 837 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 USP1O94782 785 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 CYP2C9P11712 490 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 HADHAP40939 763 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 PAPOLAP51003 745 aaKnown RBP13.4□□□□□ -0.26
USB1-207ENST00000563149 PRKAA2P54646 552 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 CRADDP78560 199 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 CDC16Q13042 620 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 INTS6LQ5JSJ4 861 aaKnown RBP13.4□□□□□ -0.26
USB1-207ENST00000563149 MARCH8Q5T0T0 291 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 CATSPER4Q7RTX7 472 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 PID1Q7Z2X4 250 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 MAVSQ7Z434 540 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 DEFB132Q7Z7B7 95 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 TMEM135Q86UB9 458 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 DCLK2Q8N568 766 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.4□□□□□ -0.26
USB1-207ENST00000563149 CCNYQ8ND76 341 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 GSTCDQ8NEC7 633 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 KCTD13Q8WZ19 329 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 HNRNPABQ99729 332 aaKnown RBP13.4□□□□□ -0.26
USB1-207ENST00000563149 RTKNQ9BST9 563 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 PPP1R12CQ9BZL4 782 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms