RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 GGCXP38435 758 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 GALCP54803 685 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 CSTF1Q05048 431 aaKnown RBP17.26■□□□□ 0.35
CLK3-207ENST00000562389 ZNF252P-AS1Q0IIN9 211 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 CDH18Q13634 790 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 EMC10Q5UCC4 262 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 C14orf80Q86SX3 495 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 CCDC117Q8IWD4 279 aaPredicted RBP17.26■□□□□ 0.35
CLK3-207ENST00000562389 ZNF683Q8IZ20 524 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 AHI1Q8N157 1196 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 CARNMT1Q8N4J0 409 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 ALLCQ8N6M5 410 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 IGSF8Q969P0 613 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 LMLNQ96KR4 655 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 CCDC42Q96M95 316 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 ABCB8Q9NUT2 735 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 IGLV3-10A0A075B6K4 115 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 H0Y626 953 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 K7ESF4 209 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 TIMM44O43615 452 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 KLF8O95600 359 aaPredicted RBP17.25■□□□□ 0.35
CLK3-207ENST00000562389 HNRNPLP14866 589 aaKnown RBP eCLIP17.25■□□□□ 0.35
CLK3-207ENST00000562389 CD70P32970 193 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 AIF1P55008 147 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 NRG1Q02297 640 aaPredicted RBP17.25■□□□□ 0.35
CLK3-207ENST00000562389 SCAPQ12770 1279 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 LMAN2Q12907 356 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 DMC1Q14565 340 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 E2F5Q15329 346 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 EOGTQ5NDL2 527 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 EGFLAMQ63HQ2 1017 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 TMEM215Q68D42 235 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 LRRC31Q6UY01 552 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 CHST9Q7L1S5 443 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 CCAR2Q8N163 923 aaKnown RBP17.25■□□□□ 0.35
CLK3-207ENST00000562389 CCDC185Q8N715 623 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 TXNDC5Q8NBS9 432 aaKnown RBP17.25■□□□□ 0.35
CLK3-207ENST00000562389 UCMAQ8WVF2 138 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 NELL1Q92832 810 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 PANX2Q96RD6 677 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 TRIM7Q9C029 511 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 OSBPL2Q9H1P3 480 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 ELOVL2Q9NXB9 296 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 SLC8A2Q9UPR5 921 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 SNX10Q9Y5X0 201 aa17.25■□□□□ 0.35
CLK3-207ENST00000562389 DRGXA6NNA5 263 aa17.24■□□□□ 0.35
CLK3-207ENST00000562389 E9PAM4 449 aa17.24■□□□□ 0.35
CLK3-207ENST00000562389 NPC1O15118 1278 aa17.24■□□□□ 0.35
CLK3-207ENST00000562389 CLDN11O75508 207 aa17.24■□□□□ 0.35
CLK3-207ENST00000562389 HOXA6P31267 233 aa17.24■□□□□ 0.35
CLK3-207ENST00000562389 IRAK1P51617 712 aa17.24■□□□□ 0.35
CLK3-207ENST00000562389 CDH4P55283 916 aa17.24■□□□□ 0.35
CLK3-207ENST00000562389 ARTNQ5T4W7 220 aa17.24■□□□□ 0.35
CLK3-207ENST00000562389 TSSK4Q6SA08 328 aa17.24■□□□□ 0.35
CLK3-207ENST00000562389 SLFN11Q7Z7L1 901 aa17.24■□□□□ 0.35
CLK3-207ENST00000562389 ADIPOR2Q86V24 386 aa17.24■□□□□ 0.35
CLK3-207ENST00000562389 CIR1Q86X95 450 aaPredicted RBP17.24■□□□□ 0.35
CLK3-207ENST00000562389 CCDC33Q8N5R6 958 aa17.24■□□□□ 0.35
CLK3-207ENST00000562389 ARHGEF26Q96DR7 871 aa17.24■□□□□ 0.35
CLK3-207ENST00000562389 NUP85Q9BW27 656 aa17.24■□□□□ 0.35
CLK3-207ENST00000562389 FAM126AQ9BYI3 521 aaPredicted RBP17.24■□□□□ 0.35
CLK3-207ENST00000562389 SPTLC3Q9NUV7 552 aa17.24■□□□□ 0.35
CLK3-207ENST00000562389 KIAA1522Q9P206 1035 aaPredicted RBP17.24■□□□□ 0.35
CLK3-207ENST00000562389 THAP10Q9P2Z0 257 aaPredicted RBP17.24■□□□□ 0.35
CLK3-207ENST00000562389 PPARGC1AQ9UBK2 798 aaKnown RBP17.24■□□□□ 0.35
CLK3-207ENST00000562389 SGK1O00141 431 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 ADAM23O75077 832 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 RNF8O76064 485 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 H2AFZP0C0S5 128 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 FECHP22830 423 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 NTSR1P30989 418 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 NRLP54845 237 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 OXCT1P55809 520 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 SLC12A1Q13621 1099 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 ACAP1Q15027 740 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 FUT11Q495W5 492 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 FSCBQ5H9T9 825 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 MANEALQ5VSG8 457 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 MBLAC2Q68D91 279 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 SCYL2Q6P3W7 929 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 H2AFVQ71UI9 128 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.23■□□□□ 0.35
CLK3-207ENST00000562389 CAMKK1Q8N5S9 505 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 CTNNBL1Q8WYA6 563 aaPredicted RBP17.23■□□□□ 0.35
CLK3-207ENST00000562389 GABRG3Q99928 467 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 NCAPGQ9BPX3 1015 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 PACSIN1Q9BY11 444 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 CIPCQ9C0C6 399 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 ZDHHC4Q9NPG8 344 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 POLR3BQ9NW08 1133 aaPredicted RBP17.23■□□□□ 0.35
CLK3-207ENST00000562389 IMPACTQ9P2X3 320 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 OR12D3Q9UGF7 316 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 FZD10Q9ULW2 581 aa17.23■□□□□ 0.35
CLK3-207ENST00000562389 TMEM253P0C7T8 217 aa17.22■□□□□ 0.35
CLK3-207ENST00000562389 ENPP2Q13822 863 aa17.22■□□□□ 0.35
CLK3-207ENST00000562389 PIGHQ14442 188 aaPredicted RBP17.22■□□□□ 0.35
CLK3-207ENST00000562389 CRY1Q16526 586 aa17.22■□□□□ 0.35
CLK3-207ENST00000562389 ALFQ53S48 1182 aa17.22■□□□□ 0.35
CLK3-207ENST00000562389 EFHC2Q5JST6 749 aa17.22■□□□□ 0.35
CLK3-207ENST00000562389 CXorf57Q6NSI4 855 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms