RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 SUN2Q9UH99 717 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 LIMA1Q9UHB6 759 aaKnown RBP18.44■□□□□ 0.54
CMTM3-204ENST00000562357 EVLQ9UI08 416 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-204ENST00000562357 XPO7Q9UIA9 1087 aaKnown RBP18.44■□□□□ 0.54
CMTM3-204ENST00000562357 ABCA7Q8IZY2 2146 aa18.43■□□□□ 0.54
CMTM3-204ENST00000562357 THADAQ6YHU6 1953 aa18.43■□□□□ 0.54
CMTM3-204ENST00000562357 LGALS16A8MUM7 142 aa18.43■□□□□ 0.54
CMTM3-204ENST00000562357 GFPT2O94808 682 aa18.43■□□□□ 0.54
CMTM3-204ENST00000562357 F9P00740 461 aa18.43■□□□□ 0.54
CMTM3-204ENST00000562357 HLA-EP13747 358 aa18.43■□□□□ 0.54
CMTM3-204ENST00000562357 KCNA4P22459 653 aa18.43■□□□□ 0.54
CMTM3-204ENST00000562357 SOX5P35711 763 aa18.43■□□□□ 0.54
CMTM3-204ENST00000562357 STAT1P42224 750 aa18.43■□□□□ 0.54
CMTM3-204ENST00000562357 UBXN1Q04323 297 aa18.43■□□□□ 0.54
CMTM3-204ENST00000562357 TRIM61Q5EBN2 209 aa18.43■□□□□ 0.54
CMTM3-204ENST00000562357 CACUL1Q86Y37 369 aa18.43■□□□□ 0.54
CMTM3-204ENST00000562357 DEFB119Q8N690 84 aa18.43■□□□□ 0.54
CMTM3-204ENST00000562357 HSPA12BQ96MM6 686 aa18.43■□□□□ 0.54
CMTM3-204ENST00000562357 TMEM245Q9H330 911 aa18.43■□□□□ 0.54
CMTM3-204ENST00000562357 A0A1B0GVM2 712 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 LNP1A1A4G5 178 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 TCAF2A6NFQ2 919 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 CFIP05156 583 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 MMEP08473 750 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 ITPKAP23677 461 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 CSKP41240 450 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 GABRB2P47870 512 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 KLK7P49862 253 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 SULT1E1P49888 294 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 CAMK2GQ13555 558 aaPredicted RBP18.42■□□□□ 0.54
CMTM3-204ENST00000562357 WDR45BQ5MNZ6 344 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 DAB2IPQ5VWQ8 1189 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 NAA35Q5VZE5 725 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 LRSAM1Q6UWE0 723 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 TRIM72Q6ZMU5 477 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 RGL4Q8IZJ4 473 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 AOPEPQ8N6M6 819 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 TTC17Q96AE7 1141 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 TOE1Q96GM8 510 aaKnown RBP18.42■□□□□ 0.54
CMTM3-204ENST00000562357 RPRD1AQ96P16 312 aaPredicted RBP18.42■□□□□ 0.54
CMTM3-204ENST00000562357 TMEM9BQ9NQ34 198 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 ITM2CQ9NQX7 267 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 RXFP3Q9NSD7 469 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 USP36Q9P275 1121 aaKnown RBP18.42■□□□□ 0.54
CMTM3-204ENST00000562357 SUSD2Q9UGT4 822 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 DMXL1Q9Y485 3027 aa18.42■□□□□ 0.54
CMTM3-204ENST00000562357 ATXN2Q99700 1313 aaKnown RBP18.42■□□□□ 0.54
CMTM3-204ENST00000562357 MEI4A8MW99 385 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 GOLGA8SH3BPF8 625 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 GNSP15586 552 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 NNMTP40261 264 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 TPMTP51580 245 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 COPAP53621 1224 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 ATXN3P54252 364 aaPredicted RBP18.41■□□□□ 0.54
CMTM3-204ENST00000562357 NOMO3P69849 1222 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 CDR2Q01850 454 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 EIF4EBP2Q13542 120 aaPredicted RBP18.41■□□□□ 0.54
CMTM3-204ENST00000562357 SLC12A1Q13621 1099 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 PTPRNQ16849 979 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 DUOXA1Q1HG43 343 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 TTC31Q49AM3 519 aaPredicted RBP18.41■□□□□ 0.54
CMTM3-204ENST00000562357 PITRM1Q5JRX3 1037 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 BRMS1LQ5PSV4 323 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 ZNF366Q8N895 744 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 CPA5Q8WXQ8 436 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 MYEOVQ96EZ4 313 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 NUP58Q9BVL2 599 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 WDCPQ9H6R7 721 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 PILRBQ9UKJ0 227 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 SIK3Q9Y2K2 1263 aa18.41■□□□□ 0.54
CMTM3-204ENST00000562357 SMTNL1A8MU46 457 aa18.4■□□□□ 0.54
CMTM3-204ENST00000562357 PATE3B3GLJ2 98 aa18.4■□□□□ 0.54
CMTM3-204ENST00000562357 RNASEH1O60930 286 aaKnown RBP18.4■□□□□ 0.54
CMTM3-204ENST00000562357 DNTTP04053 509 aa18.4■□□□□ 0.54
CMTM3-204ENST00000562357 SRPRAP08240 638 aaKnown RBP18.4■□□□□ 0.54
CMTM3-204ENST00000562357 IRX4P78413 519 aa18.4■□□□□ 0.54
CMTM3-204ENST00000562357 ZBTB16Q05516 673 aa18.4■□□□□ 0.54
CMTM3-204ENST00000562357 DEUP1Q05D60 604 aa18.4■□□□□ 0.54
CMTM3-204ENST00000562357 GFPT1Q06210 699 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-204ENST00000562357 SFSWAPQ12872 951 aaKnown RBP18.4■□□□□ 0.54
CMTM3-204ENST00000562357 PLEKHG6Q3KR16 790 aa18.4■□□□□ 0.54
CMTM3-204ENST00000562357 ANO6Q4KMQ2 910 aa18.4■□□□□ 0.54
CMTM3-204ENST00000562357 PPM1JQ5JR12 505 aa18.4■□□□□ 0.54
CMTM3-204ENST00000562357 CAVIN1Q6NZI2 390 aaKnown RBP18.4■□□□□ 0.54
CMTM3-204ENST00000562357 XYLT1Q86Y38 959 aa18.4■□□□□ 0.54
CMTM3-204ENST00000562357 CCAR2Q8N163 923 aaKnown RBP18.4■□□□□ 0.54
CMTM3-204ENST00000562357 KDM1BQ8NB78 822 aa18.4■□□□□ 0.54
CMTM3-204ENST00000562357 NPY6RQ99463 290 aa18.4■□□□□ 0.54
CMTM3-204ENST00000562357 PRMT1Q99873 361 aaKnown RBP18.4■□□□□ 0.54
CMTM3-204ENST00000562357 TMEM63CQ9P1W3 806 aa18.4■□□□□ 0.54
CMTM3-204ENST00000562357 NOCTQ9UK39 431 aaKnown RBP18.4■□□□□ 0.54
CMTM3-204ENST00000562357 VANGL2Q9ULK5 521 aa18.4■□□□□ 0.54
CMTM3-204ENST00000562357 SLC6A14Q9UN76 642 aa18.4■□□□□ 0.54
CMTM3-204ENST00000562357 PLXND1Q9Y4D7 1925 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-204ENST00000562357 MED19A0JLT2 244 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-204ENST00000562357 FAM170AA1A519 330 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 LRRC10BA6NIK2 292 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 PAGE1O75459 146 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 CCDC172P0C7W6 258 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms