RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 HBS1LQ9Y450 684 aaKnown RBP23.19■■□□□ 1.3
SYNGR3-202ENST00000562045 MIA3Q5JRA6 1907 aa23.19■■□□□ 1.3
SYNGR3-202ENST00000562045 hCG_1818297A0A087WSY0 165 aa23.19■■□□□ 1.3
SYNGR3-202ENST00000562045 CCDC188H7C350 402 aa23.19■■□□□ 1.3
SYNGR3-202ENST00000562045 CD72P21854 359 aa23.19■■□□□ 1.3
SYNGR3-202ENST00000562045 ARSEP51690 589 aa23.19■■□□□ 1.3
SYNGR3-202ENST00000562045 TERF1P54274 439 aa23.19■■□□□ 1.3
SYNGR3-202ENST00000562045 TBX4P57082 545 aa23.19■■□□□ 1.3
SYNGR3-202ENST00000562045 C2orf54Q08AI8 447 aa23.19■■□□□ 1.3
SYNGR3-202ENST00000562045 RUNX3Q13761 415 aa23.19■■□□□ 1.3
SYNGR3-202ENST00000562045 ZC3H12AQ5D1E8 599 aaKnown RBP23.19■■□□□ 1.3
SYNGR3-202ENST00000562045 SLC39A13Q96H72 371 aa23.19■■□□□ 1.3
SYNGR3-202ENST00000562045 AP1M1Q9BXS5 423 aa23.19■■□□□ 1.3
SYNGR3-202ENST00000562045 CALN1Q9BXU9 219 aa23.19■■□□□ 1.3
SYNGR3-202ENST00000562045 C11orf16Q9NQ32 467 aa23.19■■□□□ 1.3
SYNGR3-202ENST00000562045 RBM12Q9NTZ6 932 aaKnown RBP23.19■■□□□ 1.3
SYNGR3-202ENST00000562045 GPATCH2LQ9NWQ4 482 aa23.19■■□□□ 1.3
SYNGR3-202ENST00000562045 FAM86C2PA6NEL3 165 aa23.18■■□□□ 1.3
SYNGR3-202ENST00000562045 VCPP55072 806 aaKnown RBP23.18■■□□□ 1.3
SYNGR3-202ENST00000562045 SCAPQ12770 1279 aa23.18■■□□□ 1.3
SYNGR3-202ENST00000562045 PDGFRLQ15198 375 aa23.18■■□□□ 1.3
SYNGR3-202ENST00000562045 TAZQ16635 292 aa23.18■■□□□ 1.3
SYNGR3-202ENST00000562045 EFHC2Q5JST6 749 aa23.18■■□□□ 1.3
SYNGR3-202ENST00000562045 RHBDF2Q6PJF5 856 aa23.18■■□□□ 1.3
SYNGR3-202ENST00000562045 RNF34Q969K3 372 aa23.18■■□□□ 1.3
SYNGR3-202ENST00000562045 PLD4Q96BZ4 506 aa23.18■■□□□ 1.3
SYNGR3-202ENST00000562045 HEMGNQ9BXL5 484 aa23.18■■□□□ 1.3
SYNGR3-202ENST00000562045 DHX35Q9H5Z1 703 aaKnown RBP23.18■■□□□ 1.3
SYNGR3-202ENST00000562045 ECT2Q9H8V3 914 aa23.18■■□□□ 1.3
SYNGR3-202ENST00000562045 ARHGEF3Q9NR81 526 aa23.18■■□□□ 1.3
SYNGR3-202ENST00000562045 XPO7Q9UIA9 1087 aaKnown RBP23.18■■□□□ 1.3
SYNGR3-202ENST00000562045 TLR6Q9Y2C9 796 aa23.18■■□□□ 1.3
SYNGR3-202ENST00000562045 TJP3O95049 919 aa23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 CYP17A1P05093 508 aa23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 ADRA1BP35368 520 aa23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 PFKPQ01813 784 aa23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 KLF1Q13351 362 aaPredicted RBP23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 NNTQ13423 1086 aa23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 LLGL1Q15334 1064 aa23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 CA9Q16790 459 aa23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 GAB4Q2WGN9 574 aa23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 BRMS1LQ5PSV4 323 aa23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 TXNDC11Q6PKC3 985 aa23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 ANKS1BQ7Z6G8 1248 aa23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 ADAT2Q7Z6V5 191 aaKnown RBP23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 FAM71BQ8TC56 605 aa23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 CSGALNACT1Q8TDX6 532 aa23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 ZNF670Q9BS34 389 aa23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 PCDH18Q9HCL0 1135 aa23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 PIAS3Q9Y6X2 628 aa23.17■■□□□ 1.3
SYNGR3-202ENST00000562045 ZNF487B1APH4 448 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 CD48P09326 243 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 CCR1P32246 355 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 DPYSL3Q14195 570 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 MLF2Q15773 248 aaPredicted RBP23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 ITPRIPL2Q3MIP1 535 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 KAZNQ674X7 775 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 TMEM25Q86YD3 366 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 UBXN4Q92575 508 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 ATP2A3Q93084 1043 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 TKTL2Q9H0I9 626 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 ANLNQ9NQW6 1124 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 LSM7Q9UK45 103 aaKnown RBP23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 F5P12259 2224 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 KRT10P13645 584 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 L1CAMP32004 1257 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 PPP2R5DQ14738 602 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 DHCR24Q15392 516 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 PPP6R3Q5H9R7 873 aaPredicted RBP23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 LY6G5CQ5SRR4 150 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 TEX35Q5T0J7 233 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 TPRG1Q6ZUI0 275 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 MMGT1Q8N4V1 131 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 KIAA1958Q8N8K9 716 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 NOA1Q8NC60 698 aaKnown RBP23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 HERPUD2Q9BSE4 406 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 TBC1D14Q9P2M4 693 aa23.16■■□□□ 1.3
SYNGR3-202ENST00000562045 GOLGA6L7A0A1B0GV03 622 aa23.15■■□□□ 1.3
SYNGR3-202ENST00000562045 TCRBV7S2A1N4TA0A589 114 aa23.15■■□□□ 1.3
SYNGR3-202ENST00000562045 TMEM221A6NGB7 291 aa23.15■■□□□ 1.3
SYNGR3-202ENST00000562045 I6L893 689 aaPredicted RBP23.15■■□□□ 1.3
SYNGR3-202ENST00000562045 M0R296 226 aa23.15■■□□□ 1.3
SYNGR3-202ENST00000562045 TRDMT1O14717 391 aaKnown RBP23.15■■□□□ 1.3
SYNGR3-202ENST00000562045 CTIFO43310 598 aaKnown RBP23.15■■□□□ 1.3
SYNGR3-202ENST00000562045 SLC2A3P11169 496 aa23.15■■□□□ 1.3
SYNGR3-202ENST00000562045 RING1Q06587 406 aa23.15■■□□□ 1.3
SYNGR3-202ENST00000562045 MAK16Q9BXY0 300 aaKnown RBP23.15■■□□□ 1.3
SYNGR3-202ENST00000562045 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.15■■□□□ 1.3
SYNGR3-202ENST00000562045 ARHGEF38Q9NXL2 777 aa23.15■■□□□ 1.3
SYNGR3-202ENST00000562045 SLC9A3R1O14745 358 aaPredicted RBP23.14■■□□□ 1.3
SYNGR3-202ENST00000562045 GJA4P35212 333 aa23.14■■□□□ 1.3
SYNGR3-202ENST00000562045 KPNA1P52294 538 aaPredicted RBP23.14■■□□□ 1.3
SYNGR3-202ENST00000562045 SIX1Q15475 284 aaPredicted RBP23.14■■□□□ 1.3
SYNGR3-202ENST00000562045 NADSYN1Q6IA69 706 aa23.14■■□□□ 1.3
SYNGR3-202ENST00000562045 TPGS1Q6ZTW0 290 aa23.14■■□□□ 1.3
SYNGR3-202ENST00000562045 MYEOVQ96EZ4 313 aa23.14■■□□□ 1.3
SYNGR3-202ENST00000562045 KCTD15Q96SI1 283 aaPredicted RBP23.14■■□□□ 1.3
SYNGR3-202ENST00000562045 TMPRSS4Q9NRS4 437 aa23.14■■□□□ 1.3
SYNGR3-202ENST00000562045 RCOR3Q9P2K3 495 aaPredicted RBP23.14■■□□□ 1.3
SYNGR3-202ENST00000562045 MTF2Q9Y483 593 aaPredicted RBP23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms