RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 HNF1BP35680 557 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 ZNF132P52740 706 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 CST6Q15828 149 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 CBWD6Q4V339 395 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 CBWD3Q5JTY5 395 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 CBWD5Q5RIA9 395 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 ADGRF1Q5T601 910 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 SIX6OS1Q8N1H7 587 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 STK40Q8N2I9 435 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 ARHGAP18Q8N392 663 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 ANKRD52Q8NB46 1076 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 OR14C36Q8NHC7 312 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 WFIKKN2Q8TEU8 576 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 KLK6Q92876 244 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 SERAC1Q96JX3 654 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 MIS12Q9H081 205 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 NUCKS1Q9H1E3 243 aaKnown RBP12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 RSPH9Q9H1X1 276 aaPredicted RBP12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 SGK2Q9HBY8 427 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 TMEM8AQ9HCN3 771 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 XPO7Q9UIA9 1087 aaKnown RBP12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 SLCO3A1Q9UIG8 710 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 NCKAP1Q9Y2A7 1128 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 PCDHB1Q9Y5F3 818 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 MAST4O15021 2626 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 MYO18BQ8IUG5 2567 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 XPO1O14980 1071 aaKnown RBP12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 VILLO15195 856 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 TIMM44O43615 452 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 F13A1P00488 732 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 ATP5BP06576 529 aaKnown RBP12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 ZSCAN22P10073 491 aaPredicted RBP12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 CD38P28907 300 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 SLC8A1P32418 973 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 MXI1P50539 228 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 RACK1P63244 317 aaKnown RBP12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 ADAM9Q13443 819 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 INAVAQ3KP66 663 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 PIK3R6Q5UE93 754 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 TCERG1LQ5VWI1 586 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 PM20D1Q6GTS8 502 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 PCSK4Q6UW60 755 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 LRRC69Q6ZNQ3 347 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 INTS8Q75QN2 995 aaKnown RBP12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 TMPRSS12Q86WS5 348 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 SPATS2Q86XZ4 545 aaKnown RBP12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 APCDD1Q8J025 514 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 ZNF843Q8N446 348 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 SAP25Q8TEE9 199 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 INTS4Q96HW7 963 aaKnown RBP12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 MRGPRX3Q96LB0 322 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 CPNE5Q9HCH3 593 aa12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 HBS1LQ9Y450 684 aaKnown RBP12.13□□□□□ -0.47
NSMCE1-202ENST00000561960 TBC1D3DA0A087WVF3 549 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 TBC1D3IA0A087WXS9 549 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 TBC1D3EA0A087X179 549 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 TBC1D3KA0A087X1G2 549 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 A0A1W2PR77 199 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 FAM170AA1A519 330 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 TBC1D3FA6NER0 549 aaPredicted RBP12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 TBC1D3LB9A6J9 549 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 ATXN7O15265 892 aaPredicted RBP12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 FFAR2O15552 330 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 BNIP3LO60238 219 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 RTN2O75298 545 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 IL1BP01584 269 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 TBC1D3HP0C7X1 549 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 BRD2P25440 801 aaKnown RBP12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 EPHA8P29322 1005 aaPredicted RBP12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 PSMC2P35998 433 aaKnown RBP12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 ADPRHP54922 357 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 DAOAP59103 153 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 ST8SIA6P61647 398 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 BST2Q10589 180 aaKnown RBP12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 SGO2Q562F6 1265 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 PITRM1Q5JRX3 1037 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 C9orf64Q5T6V5 341 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 ARHGAP17Q68EM7 881 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 KRT39Q6A163 491 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 TBC1D3GQ6DHY5 549 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 TBC1D3CQ6IPX1 549 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 FBXL19Q6PCT2 694 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 TMC6Q7Z403 805 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 KIAA0907Q7Z7F0 614 aaPredicted RBP12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 TBC1D3Q8IZP1 549 aaPredicted RBP12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 ZNF276Q8N554 614 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 FBXL13Q8NEE6 735 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 ENGASEQ8NFI3 743 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 TFAP2BQ92481 460 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 KAT5Q92993 513 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 LMLNQ96KR4 655 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 PCED1AQ9H1Q7 454 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 GDF3Q9NR23 364 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 OLA1Q9NTK5 396 aaKnown RBP12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 RAB20Q9NX57 234 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 HESX1Q9UBX0 185 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 ERVW-1Q9UQF0 538 aa12.12□□□□□ -0.47
NSMCE1-202ENST00000561960 HECTD1Q9ULT8 2610 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms