RNA–Protein interactions for RNA: ENST00000561956.1

AC009054.2-201, humanhuman

TSL 3 BASIC

Gene AC009054.2, Length 374 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.2-201ENST00000561956 DHX34Q14147 1143 aaKnown RBP11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 COL19A1Q14993 1142 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 OASLQ15646 514 aaKnown RBP11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 GLE1Q53GS7 698 aaKnown RBP11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 RWDD4Q6NW29 188 aaKnown RBP11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 FBXL22Q6P050 247 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 C1orf228Q6PIY5 440 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 CCDC137Q6PK04 289 aaKnown RBP11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 POTEHQ6S545 545 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 TMCO3Q6UWJ1 677 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 LRRC31Q6UY01 552 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 NLRP14Q86W24 1093 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 DENND1CQ8IV53 801 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 FAM217AQ8IXS0 508 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 ING5Q8WYH8 240 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 UBXN4Q92575 508 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 P3H4Q92791 437 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 SLCO2A1Q92959 643 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 IGSF8Q969P0 613 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 LRRC1Q9BTT6 524 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 APOL5Q9BWW9 433 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 CATSPERBQ9H7T0 1116 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 DTLQ9NZJ0 730 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 CLEC1BQ9P126 229 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 CFAP97Q9P2B7 532 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 SAE1Q9UBE0 346 aaPredicted RBP11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 LSM7Q9UK45 103 aaKnown RBP11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 DNPEPQ9ULA0 475 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 VANGL2Q9ULK5 521 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 F5H5T6 163 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 GFRA2O00451 464 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 MCF2LO15068 1137 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 TBX10O75333 385 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 FSHRP23945 695 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 SERPINB6P35237 376 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 IRAK1P51617 712 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 EIF3EP60228 445 aaKnown RBP11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 DR1Q01658 176 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 SLC10A2Q12908 348 aaPredicted RBP11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 USP4Q13107 963 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 NAA30Q147X3 362 aaPredicted RBP11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 ERCC6LQ2NKX8 1250 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 ADGRF1Q5T601 910 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 RFWD3Q6PCD5 774 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 HTR3DQ70Z44 454 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 MAATS1Q7Z4T9 603 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 CCDC105Q8IYK2 499 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 LGI2Q8N0V4 545 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 NPWQ8N729 165 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 RTL3Q8N8U3 475 aaKnown RBP11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 ATL2Q8NHH9 583 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 CCDC26Q8TAB7 109 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 SH3RF2Q8TEC5 729 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 USP13Q92995 863 aaPredicted RBP11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 MYEOVQ96EZ4 313 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 ZSWIM3Q96MP5 696 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 PRICKLE1Q96MT3 831 aaPredicted RBP11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 RPRD1AQ96P16 312 aaPredicted RBP11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 OLFM3Q96PB7 478 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 DDX50Q9BQ39 737 aaKnown RBP11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 ZYG11BQ9C0D3 744 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 KLC2Q9H0B6 622 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 SMG9Q9H0W8 520 aaKnown RBP11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 ADAM7Q9H2U9 754 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 TDP1Q9NUW8 608 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 ZNF212Q9UDV6 495 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 AMACRQ9UHK6 382 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 CCL26Q9Y258 94 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 DRG1Q9Y295 367 aaKnown RBP11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 ZNF510Q9Y2H8 683 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 SH3BP1Q9Y3L3 701 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 HEY1Q9Y5J3 304 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 RAD54BQ9Y620 910 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 DENND4AQ7Z401 1863 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 BRWD1Q9NSI6 2320 aa11.17□□□□□ -0.62
AC009054.2-201ENST00000561956 E2F8A0AVK6 867 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 FAM187AA6NFU0 413 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 BHMG1C9JSJ3 638 aaPredicted RBP11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 TTI1O43156 1089 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 CNTN5O94779 1100 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 ECEL1O95672 775 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 ITGAVP06756 1048 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 RHOXF2BP0C7M4 288 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 RBP3P10745 1247 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 MRPS25P82663 173 aaKnown RBP11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 XRCC4Q13426 336 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 ZNF77Q15935 545 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 ALFQ53S48 1182 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 RABGAP1LQ5R372 815 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 AFMIDQ63HM1 303 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 CCDC70Q6NSX1 233 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 BZW1Q7L1Q6 419 aaKnown RBP11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 CIR1Q86X95 450 aaPredicted RBP11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 JAMLQ86YT9 394 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 ARHGAP12Q8IWW6 846 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 NPAS3Q8IXF0 933 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 LZTR1Q8N653 840 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 RIN3Q8TB24 985 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 GRK7Q8WTQ7 553 aa11.16□□□□□ -0.62
AC009054.2-201ENST00000561956 LRCH3Q96II8 777 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms