RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 UNGP13051 313 aaPredicted RBP16■□□□□ 0.15
CCDC113-203ENST00000561517 POLR2EP19388 210 aaKnown RBP16■□□□□ 0.15
CCDC113-203ENST00000561517 FLT3P36888 993 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 CAMK2GQ13555 558 aaPredicted RBP16■□□□□ 0.15
CCDC113-203ENST00000561517 CDH18Q13634 790 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 SLC25A52Q3SY17 297 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 FSCBQ5H9T9 825 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 BRMS1LQ5PSV4 323 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 TTC39BQ5VTQ0 682 aaPredicted RBP16■□□□□ 0.15
CCDC113-203ENST00000561517 TRNP1Q6NT89 227 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 SERPINA13PQ6UXR4 307 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 LPCAT2Q7L5N7 544 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 BNIPLQ7Z465 357 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 CCDC117Q8IWD4 279 aaPredicted RBP16■□□□□ 0.15
CCDC113-203ENST00000561517 CYB5D2Q8WUJ1 264 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 ERLEC1Q96DZ1 483 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 PCDHB18PQ96TA0 734 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 MKRN2Q9H000 416 aaKnown RBP16■□□□□ 0.15
CCDC113-203ENST00000561517 SLC6A17Q9H1V8 727 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 VPS45Q9NRW7 570 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 ARHGEF38Q9NXL2 777 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 MYO6Q9UM54 1294 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 KNL1Q8NG31 2342 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 DCHS1Q96JQ0 3298 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 A0A1B0GTH6 734 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 FAM170AA1A519 330 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 H0Y626 953 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 GOLGA8SH3BPF8 625 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 MAP3K13O43283 966 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 PAGE1O75459 146 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 ASLP04424 464 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 EPHX1P07099 455 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 HLA-EP13747 358 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 SDHBP21912 280 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 SULT1E1P49888 294 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 COPAP53621 1224 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 GSCP56915 257 aaPredicted RBP15.99■□□□□ 0.15
CCDC113-203ENST00000561517 CREB5Q02930 508 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 CENPCQ03188 943 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 PTP4A2Q12974 167 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 AUHQ13825 339 aaKnown RBP15.99■□□□□ 0.15
CCDC113-203ENST00000561517 PUM1Q14671 1186 aaKnown RBP eCLIP15.99■□□□□ 0.15
CCDC113-203ENST00000561517 CCDC6Q16204 474 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 RSPO4Q2I0M5 234 aaPredicted RBP15.99■□□□□ 0.15
CCDC113-203ENST00000561517 C5orf22Q49AR2 442 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 FILIP1LQ4L180 1135 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 FNDC3BQ53EP0 1204 aaKnown RBP15.99■□□□□ 0.15
CCDC113-203ENST00000561517 RABGAP1LQ5R372 815 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 FBXL22Q6P050 247 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 SLC36A4Q6YBV0 504 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 MMS22LQ6ZRQ5 1243 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 TMPRSS6Q8IU80 811 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 SLC30A5Q8TAD4 765 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 MYO19Q96H55 970 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 TBCBQ99426 244 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 WDCPQ9H6R7 721 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 PRDM16Q9HAZ2 1276 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 KIAA1522Q9P206 1035 aaPredicted RBP15.99■□□□□ 0.15
CCDC113-203ENST00000561517 USP36Q9P275 1121 aaKnown RBP15.99■□□□□ 0.15
CCDC113-203ENST00000561517 HS3ST4Q9Y661 456 aa15.99■□□□□ 0.15
CCDC113-203ENST00000561517 ASCC3Q8N3C0 2202 aaKnown RBP15.99■□□□□ 0.15
CCDC113-203ENST00000561517 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 A0A1B0GVM2 712 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 A0A1W2PQC6 194 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 TCAF2A6NFQ2 919 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 I6L893 689 aaPredicted RBP15.98■□□□□ 0.15
CCDC113-203ENST00000561517 ADCY5O95622 1261 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 CAVIN2O95810 425 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 CSKP41240 450 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 DHPSP49366 369 aaPredicted RBP15.98■□□□□ 0.15
CCDC113-203ENST00000561517 DEUP1Q05D60 604 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 SF3A2Q15428 464 aaKnown RBP15.98■□□□□ 0.15
CCDC113-203ENST00000561517 CLEC16AQ2KHT3 1053 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 PLEKHG6Q3KR16 790 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 PITRM1Q5JRX3 1037 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 KIAA1324Q6UXG2 1013 aaKnown RBP15.98■□□□□ 0.15
CCDC113-203ENST00000561517 SND1Q7KZF4 910 aaKnown RBP eCLIP15.98■□□□□ 0.15
CCDC113-203ENST00000561517 CYP2U1Q7Z449 544 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 PHF13Q86YI8 300 aaPredicted RBP15.98■□□□□ 0.15
CCDC113-203ENST00000561517 TMEFF1Q8IYR6 380 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 CCAR2Q8N163 923 aaKnown RBP15.98■□□□□ 0.15
CCDC113-203ENST00000561517 KDM1BQ8NB78 822 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 NETO1Q8TDF5 533 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 BAP1Q92560 729 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 IGSF8Q969P0 613 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 NAP1L5Q96NT1 182 aaPredicted RBP15.98■□□□□ 0.15
CCDC113-203ENST00000561517 C11orf70Q9BRQ4 267 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 CBX8Q9HC52 389 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 CD93Q9NPY3 652 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 ANLNQ9NQW6 1124 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 ITM2CQ9NQX7 267 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 CYP8B1Q9UNU6 501 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 PAXBP1Q9Y5B6 917 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 CHD5Q8TDI0 1954 aa15.98■□□□□ 0.15
CCDC113-203ENST00000561517 AP5Z1O43299 807 aa15.97■□□□□ 0.15
CCDC113-203ENST00000561517 ENDOD1O94919 500 aa15.97■□□□□ 0.15
CCDC113-203ENST00000561517 MOCS3O95396 460 aa15.97■□□□□ 0.15
CCDC113-203ENST00000561517 CCDC172P0C7W6 258 aa15.97■□□□□ 0.15
CCDC113-203ENST00000561517 FERP16591 822 aa15.97■□□□□ 0.15
CCDC113-203ENST00000561517 PTGER3P43115 390 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms