RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 CLDN6P56747 220 aa19.27■□□□□ 0.68
TPM1-226ENST00000560959 NXPH1P58417 271 aa19.27■□□□□ 0.68
TPM1-226ENST00000560959 CFHR1Q03591 330 aa19.27■□□□□ 0.68
TPM1-226ENST00000560959 RESP18Q5W5W9 173 aa19.27■□□□□ 0.68
TPM1-226ENST00000560959 KRT39Q6A163 491 aa19.27■□□□□ 0.68
TPM1-226ENST00000560959 OMDQ99983 421 aa19.27■□□□□ 0.68
TPM1-226ENST00000560959 LRRC4Q9HBW1 653 aa19.27■□□□□ 0.68
TPM1-226ENST00000560959 SERGEFQ9UGK8 458 aa19.27■□□□□ 0.68
TPM1-226ENST00000560959 MID1O15344 667 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 BRINP1O60477 761 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 TBL1XO60907 577 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 SIN3BO75182 1162 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 RNASEH2AO75792 299 aaKnown RBP19.26■□□□□ 0.67
TPM1-226ENST00000560959 IGLV3-27P01718 113 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 MYL1P05976 194 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 ACP1P24666 158 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 SLC11A2P49281 568 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 SGSHP51688 502 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 E2F1Q01094 437 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 TBC1D25Q3MII6 688 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 C9orf64Q5T6V5 341 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 PCSK4Q6UW60 755 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 KANSL1Q7Z3B3 1105 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 DCBLD1Q8N8Z6 715 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 MFSD2AQ8NA29 543 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 WFDC5Q8TCV5 224 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 KCTD13Q8WZ19 329 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 PAGE5Q96GU1 130 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 IPO9Q96P70 1041 aaKnown RBP19.26■□□□□ 0.67
TPM1-226ENST00000560959 CLCA2Q9UQC9 943 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 ZNF462Q96JM2 2506 aa19.26■□□□□ 0.67
TPM1-226ENST00000560959 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.25■□□□□ 0.67
TPM1-226ENST00000560959 A0A1W2PP55 124 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 J3QKU1 62 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 LATO43561 262 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 MAGEC1O60732 1142 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 SRPRAP08240 638 aaKnown RBP19.25■□□□□ 0.67
TPM1-226ENST00000560959 TRIM49P0CI25 452 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 TRIM49CP0CI26 452 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 GOT1P17174 413 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 GLDCP23378 1020 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 NR2F2P24468 414 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 SLC8A1P32418 973 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 PSMC2P35998 433 aaKnown RBP19.25■□□□□ 0.67
TPM1-226ENST00000560959 NUDT1P36639 197 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 OVGP1Q12889 678 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 BNIP3Q12983 259 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 NUGGCQ68CJ6 796 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 MSANTD2Q6P1R3 559 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 SND1Q7KZF4 910 aaKnown RBP eCLIP19.25■□□□□ 0.67
TPM1-226ENST00000560959 IQCHQ86VS3 1027 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 ERICH1Q86X53 443 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 MFN1Q8IWA4 741 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 SPACA3Q8IXA5 215 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 GRAMD1CQ8IYS0 662 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 NDRG1Q92597 394 aaKnown RBP19.25■□□□□ 0.67
TPM1-226ENST00000560959 SERAC1Q96JX3 654 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 MRGPRX3Q96LB0 322 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 MTG2Q9H4K7 406 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 CNGB3Q9NQW8 809 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 PCDHA7Q9UN72 937 aa19.25■□□□□ 0.67
TPM1-226ENST00000560959 MGAQ8IWI9 3026 aa19.24■□□□□ 0.67
TPM1-226ENST00000560959 YJEFN3A6XGL0 299 aa19.24■□□□□ 0.67
TPM1-226ENST00000560959 E7ENQ6 273 aa19.24■□□□□ 0.67
TPM1-226ENST00000560959 WNT9AO14904 365 aa19.24■□□□□ 0.67
TPM1-226ENST00000560959 C5AR1P21730 350 aa19.24■□□□□ 0.67
TPM1-226ENST00000560959 RPL13P26373 211 aaKnown RBP19.24■□□□□ 0.67
TPM1-226ENST00000560959 RHDQ02161 417 aa19.24■□□□□ 0.67
TPM1-226ENST00000560959 BST2Q10589 180 aaKnown RBP19.24■□□□□ 0.67
TPM1-226ENST00000560959 FAM133BQ5BKY9 247 aaKnown RBP19.24■□□□□ 0.67
TPM1-226ENST00000560959 RFWD3Q6PCD5 774 aa19.24■□□□□ 0.67
TPM1-226ENST00000560959 MMAAQ8IVH4 418 aaKnown RBP19.24■□□□□ 0.67
TPM1-226ENST00000560959 FAM186BQ8IYM0 893 aa19.24■□□□□ 0.67
TPM1-226ENST00000560959 FBXL13Q8NEE6 735 aa19.24■□□□□ 0.67
TPM1-226ENST00000560959 EDEM1Q92611 657 aa19.24■□□□□ 0.67
TPM1-226ENST00000560959 FAM129BQ96TA1 746 aa19.24■□□□□ 0.67
TPM1-226ENST00000560959 DDX50Q9BQ39 737 aaKnown RBP19.24■□□□□ 0.67
TPM1-226ENST00000560959 KDM4CQ9H3R0 1056 aa19.24■□□□□ 0.67
TPM1-226ENST00000560959 RAB20Q9NX57 234 aa19.24■□□□□ 0.67
TPM1-226ENST00000560959 HESX1Q9UBX0 185 aa19.24■□□□□ 0.67
TPM1-226ENST00000560959 SERTAD1Q9UHV2 236 aa19.24■□□□□ 0.67
TPM1-226ENST00000560959 TSPAN16Q9UKR8 245 aa19.24■□□□□ 0.67
TPM1-226ENST00000560959 INTS6Q9UL03 887 aaKnown RBP19.24■□□□□ 0.67
TPM1-226ENST00000560959 ITIH6Q6UXX5 1313 aa19.24■□□□□ 0.67
TPM1-226ENST00000560959 EDDM13A0A1B0GTR0 161 aa19.23■□□□□ 0.67
TPM1-226ENST00000560959 TULP2O00295 520 aa19.23■□□□□ 0.67
TPM1-226ENST00000560959 ACTN4O43707 911 aaKnown RBP19.23■□□□□ 0.67
TPM1-226ENST00000560959 ACSL4O60488 711 aa19.23■□□□□ 0.67
TPM1-226ENST00000560959 ADH1BP00325 375 aa19.23■□□□□ 0.67
TPM1-226ENST00000560959 CSKP41240 450 aa19.23■□□□□ 0.67
TPM1-226ENST00000560959 UCNP55089 124 aa19.23■□□□□ 0.67
TPM1-226ENST00000560959 INSM1Q01101 510 aaPredicted RBP19.23■□□□□ 0.67
TPM1-226ENST00000560959 ADIGQ0VDE8 80 aa19.23■□□□□ 0.67
TPM1-226ENST00000560959 PROX2Q3B8N5 592 aa19.23■□□□□ 0.67
TPM1-226ENST00000560959 ATL3Q6DD88 541 aa19.23■□□□□ 0.67
TPM1-226ENST00000560959 NAPEPLDQ6IQ20 393 aa19.23■□□□□ 0.67
TPM1-226ENST00000560959 DHX40Q8IX18 779 aaKnown RBP19.23■□□□□ 0.67
TPM1-226ENST00000560959 HJURPQ8NCD3 748 aaPredicted RBP19.23■□□□□ 0.67
TPM1-226ENST00000560959 ZNF248Q8NDW4 579 aa19.23■□□□□ 0.67
TPM1-226ENST00000560959 SEMA4DQ92854 862 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms