RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 FBXO27Q8NI29 283 aa15□□□□□ -0.01
CRTC3-210ENST00000560927 SENP8Q96LD8 212 aa15□□□□□ -0.01
CRTC3-210ENST00000560927 SMOQ99835 787 aa15□□□□□ -0.01
CRTC3-210ENST00000560927 EBF4Q9BQW3 602 aa15□□□□□ -0.01
CRTC3-210ENST00000560927 TUBB6Q9BUF5 446 aa15□□□□□ -0.01
CRTC3-210ENST00000560927 PPARGC1AQ9UBK2 798 aaKnown RBP15□□□□□ -0.01
CRTC3-210ENST00000560927 TSC2P49815 1807 aa15□□□□□ -0.01
CRTC3-210ENST00000560927 E2F8A0AVK6 867 aa15□□□□□ -0.01
CRTC3-210ENST00000560927 C17orf102A2RUQ5 167 aa15□□□□□ -0.01
CRTC3-210ENST00000560927 UNCXA6NJT0 531 aa15□□□□□ -0.01
CRTC3-210ENST00000560927 CAPN14A8MX76 684 aa15□□□□□ -0.01
CRTC3-210ENST00000560927 CAPN9O14815 690 aa15□□□□□ -0.01
CRTC3-210ENST00000560927 PPP1R12AO14974 1030 aaPredicted RBP15□□□□□ -0.01
CRTC3-210ENST00000560927 ITGA2BP08514 1039 aa15□□□□□ -0.01
CRTC3-210ENST00000560927 KCNA4P22459 653 aa15□□□□□ -0.01
CRTC3-210ENST00000560927 CLNS1AP54105 237 aaKnown RBP15□□□□□ -0.01
CRTC3-210ENST00000560927 IFRD2Q12894 506 aaPredicted RBP15□□□□□ -0.01
CRTC3-210ENST00000560927 MAP2K5Q13163 448 aa15□□□□□ -0.01
CRTC3-210ENST00000560927 ZMIZ2Q8NF64 920 aa15□□□□□ -0.01
CRTC3-210ENST00000560927 CDKL2Q92772 493 aa15□□□□□ -0.01
CRTC3-210ENST00000560927 FCRL3Q96P31 734 aaPredicted RBP15□□□□□ -0.01
CRTC3-210ENST00000560927 LBHD1Q9BQE6 289 aaPredicted RBP15□□□□□ -0.01
CRTC3-210ENST00000560927 TSPYL2Q9H2G4 693 aaPredicted RBP15□□□□□ -0.01
CRTC3-210ENST00000560927 SF3B1O75533 1304 aaKnown RBP eCLIP15□□□□□ -0.013e-6■■■■■ 102
CRTC3-210ENST00000560927 AP1G2O75843 785 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 PRKCGP05129 697 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 ENO1P06733 434 aaKnown RBP14.99□□□□□ -0.01
CRTC3-210ENST00000560927 USP17L7P0C7H9 530 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 PTPN3P26045 913 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 CDC25CP30307 473 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 DAOAP59103 153 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 FAM91A1Q658Y4 838 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 MBLAC2Q68D91 279 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 KYAT3Q6YP21 454 aaKnown RBP14.99□□□□□ -0.01
CRTC3-210ENST00000560927 ATG14Q6ZNE5 492 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 C3orf58Q8NDZ4 430 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 RAB3IL1Q8TBN0 382 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 PCED1BQ96HM7 432 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 ZNF778Q96MU6 729 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 TSPAN18Q96SJ8 248 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 RHOBTB2Q9BYZ6 727 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 KLHL8Q9P2G9 620 aaPredicted RBP14.99□□□□□ -0.01
CRTC3-210ENST00000560927 IGSF9Q9P2J2 1179 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 SNX10Q9Y5X0 201 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 RPS6KL1Q9Y6S9 549 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 IQCA1LA6NCM1 817 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 FGF3P11487 239 aaPredicted RBP14.99□□□□□ -0.01
CRTC3-210ENST00000560927 NCAM1P13591 858 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 CPT1AP50416 773 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 CLCNKBP51801 687 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 ALDH18A1P54886 795 aaKnown RBP14.99□□□□□ -0.01
CRTC3-210ENST00000560927 SEMA3BQ13214 749 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 KPNB1Q14974 876 aaKnown RBP14.99□□□□□ -0.01
CRTC3-210ENST00000560927 FAM35AQ86V20 835 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 RASSF3Q86WH2 238 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 LPPQ93052 612 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 WWP1Q9H0M0 922 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 THAP1Q9NVV9 213 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 ZFATQ9P243 1243 aa14.99□□□□□ -0.01
CRTC3-210ENST00000560927 CEP350Q5VT06 3117 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 PLIN3O60664 434 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 PDE1BQ01064 536 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 ACSBG2Q5FVE4 666 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 PPP1R14CQ8TAE6 165 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 ACMSDQ8TDX5 336 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 WDR60Q8WVS4 1066 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 MCUR1Q96AQ8 359 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 CERS2Q96G23 380 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 GAD1Q99259 594 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 SYT15Q9BQS2 421 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 PAAF1Q9BRP4 392 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 PRDM16Q9HAZ2 1276 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 MIOSQ9NXC5 875 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 MAGED2Q9UNF1 606 aaPredicted RBP14.98□□□□□ -0.01
CRTC3-210ENST00000560927 RPL26L1Q9UNX3 145 aaKnown RBP14.98□□□□□ -0.01
CRTC3-210ENST00000560927 POLBP06746 335 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 PTDSS1P48651 473 aaKnown RBP14.98□□□□□ -0.01
CRTC3-210ENST00000560927 TPI1P60174 286 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 RCN2Q14257 317 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 PCLAFQ15004 111 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 TEDDM1Q5T9Z0 273 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 CCNJLQ8IV13 435 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 TEX9Q8N6V9 391 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 FBXO41Q8TF61 875 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 EDEM1Q92611 657 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 ATXN7L3BQ96GX2 97 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 FERMT1Q9BQL6 677 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 ZNF358Q9NW07 568 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 DDIT4Q9NX09 232 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 TMEM216Q9P0N5 145 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 FBXW11Q9UKB1 542 aa14.98□□□□□ -0.01
CRTC3-210ENST00000560927 B2RBV5 119 aa14.97□□□□□ -0.01
CRTC3-210ENST00000560927 ZBTB24O43167 697 aaPredicted RBP14.97□□□□□ -0.01
CRTC3-210ENST00000560927 GLRA3O75311 464 aa14.97□□□□□ -0.01
CRTC3-210ENST00000560927 CYP2B6P20813 491 aa14.97□□□□□ -0.01
CRTC3-210ENST00000560927 ARRB2P32121 409 aa14.97□□□□□ -0.01
CRTC3-210ENST00000560927 KDSRQ06136 332 aa14.97□□□□□ -0.01
CRTC3-210ENST00000560927 CMC1Q7Z7K0 106 aa14.97□□□□□ -0.01
CRTC3-210ENST00000560927 SMC1BQ8NDV3 1235 aa14.97□□□□□ -0.01
CRTC3-210ENST00000560927 AZIN2Q96A70 460 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms