RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 GGA2Q9UJY4 613 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 STRIP2Q9ULQ0 834 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 SCML2Q9UQR0 700 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 DMTF1Q9Y222 760 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 NME7Q9Y5B8 376 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 PCDHGA7Q9Y5G6 932 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 ZFC3H1O60293 1989 aaKnown RBP9.95□□□□□ -0.82
HERC1-210ENST00000560897 UTP20O75691 2785 aaKnown RBP9.95□□□□□ -0.82
HERC1-210ENST00000560897 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.95□□□□□ -0.82
HERC1-210ENST00000560897 EPB41L2O43491 1005 aaKnown RBP9.95□□□□□ -0.82
HERC1-210ENST00000560897 SIN3BO75182 1162 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 RTN2O75298 545 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 KLKB1P03952 638 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 PABPC1P11940 636 aaKnown RBP9.95□□□□□ -0.82
HERC1-210ENST00000560897 GOT1P17174 413 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 HLA-FP30511 346 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 MAT2AP31153 395 aaKnown RBP9.95□□□□□ -0.82
HERC1-210ENST00000560897 SLC8A1P32418 973 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 PSMD8P48556 350 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 ZNF445P59923 1031 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 EHHADHQ08426 723 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 KCNAB2Q13303 367 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 EIF3IQ13347 325 aaKnown RBP9.95□□□□□ -0.82
HERC1-210ENST00000560897 ZNF177Q13360 481 aaPredicted RBP9.95□□□□□ -0.82
HERC1-210ENST00000560897 TRPC3Q13507 836 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 CLCA4Q14CN2 919 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 TGIF1Q15583 401 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 IL17AQ16552 155 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 CDKN3Q16667 212 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 POM121L1PQ3SYA9 428 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 SETMARQ53H47 684 aaPredicted RBP9.95□□□□□ -0.82
HERC1-210ENST00000560897 FHL5Q5TD97 284 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 BORAQ6PGQ7 559 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 ZNF720Q7Z2F6 126 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 EFL1Q7Z2Z2 1120 aaKnown RBP9.95□□□□□ -0.82
HERC1-210ENST00000560897 GPD1LQ8N335 351 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 FBXO39Q8N4B4 442 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 ZSWIM2Q8NEG5 633 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 OR5B17Q8NGF7 314 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 WDR48Q8TAF3 677 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 JAKMIP2Q96AA8 810 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 IKZF4Q9H2S9 585 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 KLHL11Q9NVR0 708 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 OSER1Q9NX31 292 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 AGO1Q9UL18 857 aaKnown RBP9.95□□□□□ -0.82
HERC1-210ENST00000560897 PLAAQ9Y263 795 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 PCDHA5Q9Y5H7 936 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 ITPR2Q14571 2701 aa9.95□□□□□ -0.82
HERC1-210ENST00000560897 PMS2P1A4D2B8 440 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 VWA3AA6NCI4 1184 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 PRAMEF26H0Y7S4 382 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 PLD2O14939 933 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 LATO43561 262 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 EIF5BO60841 1220 aaKnown RBP9.94□□□□□ -0.82
HERC1-210ENST00000560897 PIAS2O75928 621 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 GCNT3O95395 438 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 ADH1BP00325 375 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 FAM200BP0CF97 657 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 TNFRSF8P28908 595 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 POLE2P56282 527 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 PPP2CBP62714 309 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 PPP2CAP67775 309 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 EFEMP1Q12805 493 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 SRSF6Q13247 344 aaKnown RBP9.94□□□□□ -0.82
HERC1-210ENST00000560897 SPIDRQ14159 915 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 ME3Q16798 604 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 L1TD1Q5T7N2 865 aaKnown RBP9.94□□□□□ -0.82
HERC1-210ENST00000560897 ZCCHC8Q6NZY4 707 aaKnown RBP9.94□□□□□ -0.82
HERC1-210ENST00000560897 CRTC1Q6UUV9 634 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 RSRC2Q7L4I2 434 aaKnown RBP9.94□□□□□ -0.82
HERC1-210ENST00000560897 TRAPPC11Q7Z392 1133 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 ADIPOR2Q86V24 386 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 VASH2Q86V25 355 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 SFR1Q86XK3 245 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 WDR49Q8IV35 697 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 STRADBQ9C0K7 418 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 MTG2Q9H4K7 406 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 PCIF1Q9H4Z3 704 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 NMUR1Q9HB89 426 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 TUBD1Q9UJT1 453 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 ITPR3Q14573 2671 aa9.94□□□□□ -0.82
HERC1-210ENST00000560897 FBN2P35556 2912 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 SLC12A8A0AV02 714 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 ZNF233A6NK53 670 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 K7ESM1 405 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 KIAA0391O15091 583 aaKnown RBP9.93□□□□□ -0.82
HERC1-210ENST00000560897 SCAMP1O15126 338 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 SLC26A4O43511 780 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 JMJD7P0C870 316 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 CCDC130P13994 396 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 TNNI1P19237 187 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 POU3F2P20265 443 aaPredicted RBP9.93□□□□□ -0.82
HERC1-210ENST00000560897 C5AR1P21730 350 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 HOXD9P28356 352 aaPredicted RBP9.93□□□□□ -0.82
HERC1-210ENST00000560897 UBA7P41226 1012 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 OXCT1P55809 520 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 CYP4F2P78329 520 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 KCNMA1Q12791 1236 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 MCM6Q14566 821 aa9.93□□□□□ -0.82
HERC1-210ENST00000560897 HNRNPA1L2Q32P51 320 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms