RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 PIK3R6Q5UE93 754 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 DARS2Q6PI48 645 aaKnown RBP8.87□□□□□ -0.99
TRAF3-209ENST00000560463 NPNTQ6UXI9 565 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 TMEM184AQ6ZMB5 413 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 PCGF5Q86SE9 256 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 DDX42Q86XP3 938 aaKnown RBP eCLIP8.87□□□□□ -0.99
TRAF3-209ENST00000560463 CDKL3Q8IVW4 592 aaPredicted RBP8.87□□□□□ -0.99
TRAF3-209ENST00000560463 HS6ST3Q8IZP7 471 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 BBOF1Q8ND07 529 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 GDPD5Q8WTR4 605 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 RTP4Q96DX8 246 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 PRMT1Q99873 361 aaKnown RBP8.87□□□□□ -0.99
TRAF3-209ENST00000560463 FAM118BQ9BPY3 351 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 TMEM121Q9BTD3 319 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 ZYG11BQ9C0D3 744 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 EPC1Q9H2F5 836 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 ATXN3LQ9H3M9 355 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 SFXN1Q9H9B4 322 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 PCDH9Q9HC56 1237 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 TRPC7Q9HCX4 862 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 ETNK2Q9NVF9 386 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 WHRNQ9P202 907 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 STOML2Q9UJZ1 356 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 NEU3Q9UQ49 428 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 NEU2Q9Y3R4 380 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 REV3LO60673 3130 aa8.87□□□□□ -0.99
TRAF3-209ENST00000560463 MYO10Q9HD67 2058 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 TMEM265A0A087WTH1 108 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 A0A1W2PRU2 124 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 F5H5T6 163 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 SMAPO00193 183 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 PER2O15055 1255 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 MTSS1O43312 755 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 MFSD11O43934 449 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 CSPG5O95196 566 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 CKMP06732 381 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 RHOP08100 348 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 ITIH2P19823 946 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 TACR2P21452 398 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 CORO1AP31146 461 aaKnown RBP8.86□□□□□ -0.99
TRAF3-209ENST00000560463 MAPKAPK2P49137 400 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 CYP4F8P98187 520 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 GBE1Q04446 702 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 SLC10A2Q12908 348 aaPredicted RBP8.86□□□□□ -0.99
TRAF3-209ENST00000560463 TTC39BQ5VTQ0 682 aaPredicted RBP8.86□□□□□ -0.99
TRAF3-209ENST00000560463 RAP1GAP2Q684P5 730 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 TXNDC8Q6A555 127 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 HEATR6Q6AI08 1181 aaKnown RBP8.86□□□□□ -0.99
TRAF3-209ENST00000560463 RWDD4Q6NW29 188 aaKnown RBP8.86□□□□□ -0.99
TRAF3-209ENST00000560463 EMBQ6PCB8 327 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 ADGRD2Q7Z7M1 963 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 RBM23Q86U06 439 aaKnown RBP8.86□□□□□ -0.99
TRAF3-209ENST00000560463 ZC3H18Q86VM9 953 aaKnown RBP8.86□□□□□ -0.99
TRAF3-209ENST00000560463 CHSY1Q86X52 802 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 DENND1CQ8IV53 801 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 ZNF683Q8IZ20 524 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 UMODL1-AS1Q8N2C9 162 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 ARL14EPQ8N8R7 260 aaPredicted RBP8.86□□□□□ -0.99
TRAF3-209ENST00000560463 MAB21L3Q8N8X9 362 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 TFB1MQ8WVM0 346 aaKnown RBP8.86□□□□□ -0.99
TRAF3-209ENST00000560463 CASKIN2Q8WXE0 1202 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 IFT81Q8WYA0 676 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 LRRC45Q96CN5 670 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 HDAC11Q96DB2 347 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 SNF8Q96H20 258 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 ZFRQ96KR1 1074 aaKnown RBP8.86□□□□□ -0.99
TRAF3-209ENST00000560463 QKIQ96PU8 341 aaKnown RBP eCLIP8.86□□□□□ -0.99
TRAF3-209ENST00000560463 CYP2S1Q96SQ9 504 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 TRIM51Q9BSJ1 452 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 TSPYL1Q9H0U9 437 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 PRO3102Q9H379 93 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 NSUN3Q9H649 340 aaKnown RBP8.86□□□□□ -0.99
TRAF3-209ENST00000560463 TASP1Q9H6P5 420 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 ARFGAP3Q9NP61 516 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 TMEM248Q9NWD8 314 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 DNMT3BQ9UBC3 853 aaKnown RBP8.86□□□□□ -0.99
TRAF3-209ENST00000560463 ASIC3Q9UHC3 531 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 LSM7Q9UK45 103 aaKnown RBP8.86□□□□□ -0.99
TRAF3-209ENST00000560463 VANGL2Q9ULK5 521 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 CPQQ9Y646 472 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 TRIOBPQ9H2D6 2365 aa8.86□□□□□ -0.99
TRAF3-209ENST00000560463 ZSCAN5CA6NGD5 496 aaPredicted RBP8.85□□□□□ -0.99
TRAF3-209ENST00000560463 GCATO75600 419 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 STK10O94804 968 aaKnown RBP8.85□□□□□ -0.99
TRAF3-209ENST00000560463 IFNB1P01574 187 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 TCF3P15923 654 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 CCNCP24863 283 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 IVDP26440 423 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 WEE1P30291 646 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 CHKAP35790 457 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 AVPR1AP37288 418 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 ADCY8P40145 1251 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 GARSP41250 739 aaKnown RBP8.85□□□□□ -0.99
TRAF3-209ENST00000560463 RPL21P46778 160 aaKnown RBP8.85□□□□□ -0.99
TRAF3-209ENST00000560463 CARSP49589 748 aaKnown RBP8.85□□□□□ -0.99
TRAF3-209ENST00000560463 NDST2P52849 883 aa8.85□□□□□ -0.99
TRAF3-209ENST00000560463 YBEYP58557 167 aaPredicted RBP8.85□□□□□ -0.99
TRAF3-209ENST00000560463 MRPS25P82663 173 aaKnown RBP8.85□□□□□ -0.99
TRAF3-209ENST00000560463 PPIDQ08752 370 aaKnown RBP8.85□□□□□ -0.99
TRAF3-209ENST00000560463 GALNT2Q10471 571 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms