RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 BMPR1BO00238 502 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 PRPF3O43395 683 aaKnown RBP3.13□□□□□ -1.91
SPG11-222ENST00000560435 ZNF12P17014 697 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 VEGFCP49767 419 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 SELENOVP59797 346 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 ZP1P60852 638 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 SEMA3BQ13214 749 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 TDRD12Q587J7 1177 aaKnown RBP3.13□□□□□ -1.91
SPG11-222ENST00000560435 LCE3CQ5T5A8 94 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 DCAF12L2Q5VW00 463 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 ENGASEQ8NFI3 743 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 ABHD5Q8WTS1 349 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 LRGUKQ96M69 825 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 ZNF347Q96SE7 839 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 PKP4Q99569 1192 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 ABHD14AQ9BUJ0 271 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 C1QTNF5Q9BXJ0 243 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 SDF2L1Q9HCN8 221 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 HOMER2Q9NSB8 354 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 IGSF9Q9P2J2 1179 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 ZNF212Q9UDV6 495 aa3.13□□□□□ -1.91
SPG11-222ENST00000560435 ANTXRLA6NF34 631 aa3.12□□□□□ -1.91
SPG11-222ENST00000560435 PPP6R2O75170 966 aa3.12□□□□□ -1.91
SPG11-222ENST00000560435 NFATC1O95644 943 aa3.12□□□□□ -1.91
SPG11-222ENST00000560435 TGM2P21980 687 aa3.12□□□□□ -1.91
SPG11-222ENST00000560435 GPS1Q13098 491 aa3.12□□□□□ -1.91
SPG11-222ENST00000560435 CCDC6Q16204 474 aa3.12□□□□□ -1.91
SPG11-222ENST00000560435 TMEM196Q5HYL7 178 aa3.12□□□□□ -1.91
SPG11-222ENST00000560435 ABLIM2Q6H8Q1 611 aa3.12□□□□□ -1.91
SPG11-222ENST00000560435 SDR16C5Q8N3Y7 309 aa3.12□□□□□ -1.91
SPG11-222ENST00000560435 KAT2AQ92830 837 aa3.12□□□□□ -1.91
SPG11-222ENST00000560435 IGSF21Q96ID5 467 aa3.12□□□□□ -1.91
SPG11-222ENST00000560435 WDR77Q9BQA1 342 aaPredicted RBP3.12□□□□□ -1.91
SPG11-222ENST00000560435 OGDHLQ9ULD0 1010 aa3.12□□□□□ -1.91
SPG11-222ENST00000560435 L1RE1Q9UN81 338 aa3.12□□□□□ -1.91
SPG11-222ENST00000560435 B3GNT3Q9Y2A9 372 aa3.12□□□□□ -1.91
SPG11-222ENST00000560435 I6L893 689 aaPredicted RBP3.11□□□□□ -1.91
SPG11-222ENST00000560435 CNTN5O94779 1100 aa3.11□□□□□ -1.91
SPG11-222ENST00000560435 MYBP10242 640 aa3.11□□□□□ -1.91
SPG11-222ENST00000560435 ARP10275 920 aa3.11□□□□□ -1.91
SPG11-222ENST00000560435 GLIPR1P48060 266 aa3.11□□□□□ -1.91
SPG11-222ENST00000560435 HLFQ16534 295 aa3.11□□□□□ -1.91
SPG11-222ENST00000560435 FSCBQ5H9T9 825 aa3.11□□□□□ -1.91
SPG11-222ENST00000560435 ENTPD8Q5MY95 495 aa3.11□□□□□ -1.91
SPG11-222ENST00000560435 TLDC1Q6P9B6 456 aa3.11□□□□□ -1.91
SPG11-222ENST00000560435 SESTD1Q86VW0 696 aa3.11□□□□□ -1.91
SPG11-222ENST00000560435 FAM216AQ8WUB2 273 aa3.11□□□□□ -1.91
SPG11-222ENST00000560435 MSLNLQ96KJ4 702 aa3.11□□□□□ -1.91
SPG11-222ENST00000560435 PRDM16Q9HAZ2 1276 aa3.11□□□□□ -1.91
SPG11-222ENST00000560435 IL21RQ9HBE5 538 aa3.11□□□□□ -1.91
SPG11-222ENST00000560435 RNF146Q9NTX7 359 aa3.11□□□□□ -1.91
SPG11-222ENST00000560435 SNED1Q8TER0 1413 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 VWA5AO00534 786 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 NEURL1O76050 574 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 PAK4O96013 591 aaPredicted RBP3.1□□□□□ -1.91
SPG11-222ENST00000560435 LDLRP01130 860 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 MT-ND5P03915 603 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 LCKP06239 509 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 ALADP13716 330 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 POLE2P56282 527 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 PMPCAQ10713 525 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 ILF3Q12906 894 aaKnown RBP eCLIP3.1□□□□□ -1.91
SPG11-222ENST00000560435 SLC39A14Q15043 492 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 PLCB4Q15147 1175 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 PMS2CLQ68D20 193 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 CCDC144NLQ6NUI1 221 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 Q6ZSV7 163 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 DBF4BQ8NFT6 615 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 SNX22Q96L94 193 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 FIZ1Q96SL8 496 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.1□□□□□ -1.91
SPG11-222ENST00000560435 ZNF287Q9HBT7 754 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 ZBTB26Q9HCK0 441 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 HEYLQ9NQ87 328 aaPredicted RBP3.1□□□□□ -1.91
SPG11-222ENST00000560435 DONSONQ9NYP3 566 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 SBNO2Q9Y2G9 1366 aa3.1□□□□□ -1.91
SPG11-222ENST00000560435 MS4A18H0YCH9 400 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 LIASO43766 372 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 CCNT2O60583 730 aaKnown RBP3.09□□□□□ -1.91
SPG11-222ENST00000560435 CTNND1O60716 968 aaKnown RBP3.09□□□□□ -1.91
SPG11-222ENST00000560435 CHRNB2P17787 502 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 ATICP31939 592 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 PMS2P54278 862 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 TUBA1BP68363 451 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 ACSM2AQ08AH3 577 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 PIN1Q13526 163 aaPredicted RBP3.09□□□□□ -1.91
SPG11-222ENST00000560435 DUSP6Q16828 381 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 ALG10Q5BKT4 473 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 ALG10BQ5I7T1 473 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 EPM2AIP1Q7L775 607 aaPredicted RBP3.09□□□□□ -1.91
SPG11-222ENST00000560435 KRT28Q7Z3Y7 464 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 FJX1Q86VR8 437 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 CAMK1DQ8IU85 385 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 SLC25A41Q8N5S1 370 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 KDM1BQ8NB78 822 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 OR14A16Q8NHC5 309 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 TMED6Q8WW62 240 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 APIPQ96GX9 242 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 LRRC27Q9C0I9 530 aa3.09□□□□□ -1.91
SPG11-222ENST00000560435 AS3MTQ9HBK9 375 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms