RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 GLI1P08151 1106 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 PABPC1P11940 636 aaKnown RBP15.23■□□□□ 0.03
IDH3A-219ENST00000560414 SDHBP21912 280 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 COPB1P53618 953 aaKnown RBP15.23■□□□□ 0.03
IDH3A-219ENST00000560414 POLR2FP61218 127 aaKnown RBP15.23■□□□□ 0.03
IDH3A-219ENST00000560414 SLC6A3Q01959 620 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 MYL5Q02045 173 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 EIF4EBP2Q13542 120 aaPredicted RBP15.23■□□□□ 0.03
IDH3A-219ENST00000560414 MS4A13Q5J8X5 152 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 MPP7Q5T2T1 576 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 MBLAC2Q68D91 279 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 RNF43Q68DV7 783 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 SERPINA13PQ6UXR4 307 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 ERMP1Q7Z2K6 904 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 CYP2U1Q7Z449 544 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 KIAA0907Q7Z7F0 614 aaPredicted RBP15.23■□□□□ 0.03
IDH3A-219ENST00000560414 NOP9Q86U38 636 aaKnown RBP15.23■□□□□ 0.03
IDH3A-219ENST00000560414 MFN1Q8IWA4 741 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 LGI2Q8N0V4 545 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 CARNMT1Q8N4J0 409 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 ZNF366Q8N895 744 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.23■□□□□ 0.03
IDH3A-219ENST00000560414 HJURPQ8NCD3 748 aaPredicted RBP15.23■□□□□ 0.03
IDH3A-219ENST00000560414 TMEM35BQ8NCS4 154 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 WFIKKN2Q8TEU8 576 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 DDX50Q9BQ39 737 aaKnown RBP15.23■□□□□ 0.03
IDH3A-219ENST00000560414 MKRN2Q9H000 416 aaKnown RBP15.23■□□□□ 0.03
IDH3A-219ENST00000560414 ASNSD1Q9NWL6 643 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 DDIT4Q9NX09 232 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 LAMA1P25391 3075 aa15.23■□□□□ 0.03
IDH3A-219ENST00000560414 IGHV1OR15-9A0A0B4J2B8 117 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 SLC30A4O14863 429 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 SYNCRIPO60506 623 aaKnown RBP15.22■□□□□ 0.03
IDH3A-219ENST00000560414 FOXD2O60548 495 aaPredicted RBP15.22■□□□□ 0.03
IDH3A-219ENST00000560414 GFPT2O94808 682 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 EPHX1P07099 455 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 TPM2P07951 284 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 MMEP08473 750 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 TACR2P21452 398 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 CDH5P33151 784 aaPredicted RBP15.22■□□□□ 0.03
IDH3A-219ENST00000560414 RNASE9P60153 205 aaKnown RBP15.22■□□□□ 0.03
IDH3A-219ENST00000560414 RPL6Q02878 288 aaKnown RBP15.22■□□□□ 0.03
IDH3A-219ENST00000560414 LMAN2Q12907 356 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 NCAPHQ15003 741 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 PTPRNQ16849 979 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 FNDC3BQ53EP0 1204 aaKnown RBP15.22■□□□□ 0.03
IDH3A-219ENST00000560414 C2CD6Q53TS8 623 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 FSCBQ5H9T9 825 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 FKBP15Q5T1M5 1219 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 MMS22LQ6ZRQ5 1243 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 SLC26A9Q7LBE3 791 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 CHSY1Q86X52 802 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 CACUL1Q86Y37 369 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 AHI1Q8N157 1196 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 FIBINQ8TAL6 211 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 RNF34Q969K3 372 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 LMLNQ96KR4 655 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 BTN2A3PQ96KV6 586 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 RTKNQ9BST9 563 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 IRX2Q9BZI1 471 aaPredicted RBP15.22■□□□□ 0.03
IDH3A-219ENST00000560414 HSD3B7Q9H2F3 369 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 NLRC4Q9NPP4 1024 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.22■□□□□ 0.03
IDH3A-219ENST00000560414 LIMA1Q9UHB6 759 aaKnown RBP15.22■□□□□ 0.03
IDH3A-219ENST00000560414 SIK3Q9Y2K2 1263 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 NUP205Q92621 2012 aa15.22■□□□□ 0.03
IDH3A-219ENST00000560414 SPTBN2O15020 2390 aa15.21■□□□□ 0.03
IDH3A-219ENST00000560414 MED19A0JLT2 244 aaPredicted RBP15.21■□□□□ 0.03
IDH3A-219ENST00000560414 TYW5A2RUC4 315 aaKnown RBP15.21■□□□□ 0.03
IDH3A-219ENST00000560414 KCNU1A8MYU2 1149 aa15.21■□□□□ 0.03
IDH3A-219ENST00000560414 ZNF217O75362 1048 aa15.21■□□□□ 0.03
IDH3A-219ENST00000560414 DAB1O75553 588 aa15.21■□□□□ 0.03
IDH3A-219ENST00000560414 POLR2EP19388 210 aaKnown RBP15.21■□□□□ 0.03
IDH3A-219ENST00000560414 CDK11BP21127 795 aaKnown RBP15.21■□□□□ 0.03
IDH3A-219ENST00000560414 SNX16P57768 344 aa15.21■□□□□ 0.03
IDH3A-219ENST00000560414 TYRO3Q06418 890 aa15.21■□□□□ 0.03
IDH3A-219ENST00000560414 NME3Q13232 169 aa15.21■□□□□ 0.03
IDH3A-219ENST00000560414 SYCP1Q15431 976 aa15.21■□□□□ 0.03
IDH3A-219ENST00000560414 ERICH1Q86X53 443 aa15.21■□□□□ 0.03
IDH3A-219ENST00000560414 TMPRSS6Q8IU80 811 aa15.21■□□□□ 0.03
IDH3A-219ENST00000560414 ATP6V0D2Q8N8Y2 350 aa15.21■□□□□ 0.03
IDH3A-219ENST00000560414 EPS8L1Q8TE68 723 aa15.21■□□□□ 0.03
IDH3A-219ENST00000560414 SLC20A1Q8WUM9 679 aa15.21■□□□□ 0.03
IDH3A-219ENST00000560414 CPA5Q8WXQ8 436 aa15.21■□□□□ 0.03
IDH3A-219ENST00000560414 PRDM16Q9HAZ2 1276 aa15.21■□□□□ 0.03
IDH3A-219ENST00000560414 TMEM74BQ9NUR3 256 aa15.21■□□□□ 0.03
IDH3A-219ENST00000560414 INTS6Q9UL03 887 aaKnown RBP15.21■□□□□ 0.03
IDH3A-219ENST00000560414 PLA2G4CQ9UP65 541 aa15.21■□□□□ 0.03
IDH3A-219ENST00000560414 CACNA1AO00555 2505 aa15.2■□□□□ 0.02
IDH3A-219ENST00000560414 ATXN2Q99700 1313 aaKnown RBP15.2■□□□□ 0.02
IDH3A-219ENST00000560414 LGALS16A8MUM7 142 aa15.2■□□□□ 0.02
IDH3A-219ENST00000560414 M0QYT0 321 aa15.2■□□□□ 0.02
IDH3A-219ENST00000560414 AP5Z1O43299 807 aa15.2■□□□□ 0.02
IDH3A-219ENST00000560414 LUC7L3O95232 432 aaKnown RBP15.2■□□□□ 0.02
IDH3A-219ENST00000560414 DLDP09622 509 aaKnown RBP15.2■□□□□ 0.02
IDH3A-219ENST00000560414 ZNF18P17022 549 aa15.2■□□□□ 0.02
IDH3A-219ENST00000560414 TFE3P19532 575 aaPredicted RBP15.2■□□□□ 0.02
IDH3A-219ENST00000560414 ABCB4P21439 1286 aa15.2■□□□□ 0.02
IDH3A-219ENST00000560414 ITPKAP23677 461 aa15.2■□□□□ 0.02
IDH3A-219ENST00000560414 CCR1P32246 355 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms