RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 LACRTQ9GZZ8 138 aa13.75□□□□□ -0.21
TRAF3-208ENST00000560371 ZDHHC6Q9H6R6 413 aa13.75□□□□□ -0.21
TRAF3-208ENST00000560371 ZBTB14O43829 449 aa13.75□□□□□ -0.21
TRAF3-208ENST00000560371 KATNA1O75449 491 aa13.75□□□□□ -0.21
TRAF3-208ENST00000560371 SP100P23497 879 aaPredicted RBP13.75□□□□□ -0.21
TRAF3-208ENST00000560371 CHRNB3Q05901 458 aa13.75□□□□□ -0.21
TRAF3-208ENST00000560371 SERPINA13PQ6UXR4 307 aa13.75□□□□□ -0.21
TRAF3-208ENST00000560371 UNC93AQ86WB7 457 aa13.75□□□□□ -0.21
TRAF3-208ENST00000560371 POLG2Q9UHN1 485 aa13.75□□□□□ -0.21
TRAF3-208ENST00000560371 C3P01024 1663 aa13.75□□□□□ -0.21
TRAF3-208ENST00000560371 GLRA2P23416 452 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 DNAAF5Q86Y56 855 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 WNT8BQ93098 351 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 SLC4A9Q96Q91 983 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 HEY2Q9UBP5 337 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 MEIS2O14770 477 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 INSCQ1MX18 579 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 CENPLQ8N0S6 344 aaPredicted RBP13.74□□□□□ -0.21
TRAF3-208ENST00000560371 CAMKK1Q8N5S9 505 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 MAGED4Q96JG8 741 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 HACD1B0YJ81 288 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 TM4SF1P30408 202 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 GRIN3AQ8TCU5 1115 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 THAP11Q96EK4 314 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 SPACA7Q96KW9 195 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 SHOC2Q9UQ13 582 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 ADCK1Q86TW2 530 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 PPP1R10Q96QC0 940 aaKnown RBP13.74□□□□□ -0.21
TRAF3-208ENST00000560371 FGF10O15520 208 aaPredicted RBP13.74□□□□□ -0.21
TRAF3-208ENST00000560371 VAPBO95292 243 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 PAX3P23760 479 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 GRK2P25098 689 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 NPY2RP49146 381 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 ZNF470Q6ECI4 717 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 CYP4Z1Q86W10 505 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 LPPQ93052 612 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 VAT1Q99536 393 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 PIH1D1Q9NWS0 290 aaKnown RBP13.74□□□□□ -0.21
TRAF3-208ENST00000560371 KNL1Q8NG31 2342 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 MPOP05164 745 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 ILF2Q12905 390 aaKnown RBP13.74□□□□□ -0.21
TRAF3-208ENST00000560371 FBXO39Q8N4B4 442 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 C18orf25Q96B23 403 aaPredicted RBP13.74□□□□□ -0.21
TRAF3-208ENST00000560371 SLC24A2Q9UI40 661 aa13.74□□□□□ -0.21
TRAF3-208ENST00000560371 CXCL14O95715 111 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 IL1BP01584 269 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 ITGA7Q13683 1181 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 CBWD6Q4V339 395 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 WLSQ5T9L3 541 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 KIAA1324Q6UXG2 1013 aaKnown RBP13.73□□□□□ -0.21
TRAF3-208ENST00000560371 BTNL9Q6UXG8 535 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 PPTC7Q8NI37 304 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 PHTF1Q9UMS5 762 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 CRYL1Q9Y2S2 319 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 SPATA31C2B4DYI2 1134 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 NR5A2O00482 541 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 MGAT1P26572 445 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 GTF2E2P29084 291 aaKnown RBP13.73□□□□□ -0.21
TRAF3-208ENST00000560371 PEX5P50542 639 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 CNGA2Q16280 664 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 SPANXN3Q5MJ09 141 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 NOL9Q5SY16 702 aaKnown RBP13.73□□□□□ -0.21
TRAF3-208ENST00000560371 EIF4E1BA6NMX2 242 aaKnown RBP13.73□□□□□ -0.21
TRAF3-208ENST00000560371 IFNA14P01570 189 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 NFICP08651 508 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 CRABP2P29373 138 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 MARSP56192 900 aaKnown RBP13.73□□□□□ -0.21
TRAF3-208ENST00000560371 ATAD3BQ5T9A4 648 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 HLA-DQA1Q5Y7H0 255 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 RBM23Q86U06 439 aaKnown RBP13.73□□□□□ -0.21
TRAF3-208ENST00000560371 DENND1CQ8IV53 801 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 TDRD5Q8NAT2 981 aaKnown RBP13.73□□□□□ -0.21
TRAF3-208ENST00000560371 CCT8L1PA6NM43 557 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 SNTNA6NMZ2 147 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 ANKRD63C9JTQ0 380 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 PSMD10O75832 226 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 PTENP60484 403 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 GRTP1Q5TC63 336 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 ZCCHC8Q6NZY4 707 aaKnown RBP13.73□□□□□ -0.21
TRAF3-208ENST00000560371 ACO2Q99798 780 aaKnown RBP13.73□□□□□ -0.21
TRAF3-208ENST00000560371 BAZ2AQ9UIF9 1905 aaKnown RBP13.73□□□□□ -0.21
TRAF3-208ENST00000560371 ZNF839A8K0R7 811 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 CYP2C18P33260 490 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 NFYCQ13952 458 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 STK40Q8N2I9 435 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 KLRG1Q96E93 195 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.73□□□□□ -0.215e-6■■■■■ 32.4
TRAF3-208ENST00000560371 KLHL28Q9NXS3 571 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 PCDHA3Q9Y5H8 950 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 GRK4P32298 578 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 TTC7BQ86TV6 843 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 TRIM69Q86WT6 500 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 ZNF229Q9UJW7 825 aa13.73□□□□□ -0.21
TRAF3-208ENST00000560371 SCAMP3O14828 347 aaKnown RBP13.72□□□□□ -0.21
TRAF3-208ENST00000560371 GP5P40197 560 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 MMRN1Q13201 1228 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 REXO1L1PQ8IX06 675 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 APBB2Q92870 758 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 SLC35C1Q96A29 364 aa13.72□□□□□ -0.21
TRAF3-208ENST00000560371 TBL1YQ9BQ87 522 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms