RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 KIAA1614Q5VZ46 1190 aa13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 FAM173BQ6P4H8 233 aa13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 MMAAQ8IVH4 418 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 LSMEM2Q8N112 164 aa13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 ARHGAP18Q8N392 663 aa13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 MFSD2AQ8NA29 543 aa13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 TAF4BQ92750 862 aa13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 LMLNQ96KR4 655 aa13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 OMDQ99983 421 aa13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 DPH1Q9BZG8 443 aa13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 FOXD4L1Q9NU39 408 aa13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 CGNQ9P2M7 1197 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 TFIP11Q9UBB9 837 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 IL17BQ9UHF5 180 aa13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 FZD4Q9ULV1 537 aa13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 LATO43561 262 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 RNASEH1O60930 286 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 USP12O75317 370 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 TRIM21P19474 475 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 SLC8A1P32418 973 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 HARS2P49590 506 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 PPP2CBP62714 309 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 PPP2CAP67775 309 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 SFSWAPQ12872 951 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 SLC45A4Q5BKX6 768 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 RAB41Q5JT25 222 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 ADGRF1Q5T601 910 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 NAPEPLDQ6IQ20 393 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 CNNM4Q6P4Q7 775 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 SV2AQ7L0J3 742 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 BHLHA9Q7RTU4 235 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 PRICKLE2Q7Z3G6 844 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 SLC25A45Q8N413 288 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 AADATQ8N5Z0 425 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 NDRG1Q92597 394 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 TTC17Q96AE7 1141 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 INTS4Q96HW7 963 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 VCPIP1Q96JH7 1222 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 MRGPRX3Q96LB0 322 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 TRIM4Q9C037 500 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 LRRC27Q9C0I9 530 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 POLR1BQ9H9Y6 1135 aa13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 APOBEC3GQ9HC16 384 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-213ENST00000560127 K7ENP7 123 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 OPA1O60313 960 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 CSO75390 466 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 HLA-DRAP01903 254 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 GOT1P17174 413 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 CD58P19256 250 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 DAB2P98082 770 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 ARID5BQ14865 1188 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 KNOP1Q1ED39 458 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 COLEC12Q5KU26 742 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 C1orf220Q5T0J3 134 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 RFWD3Q6PCD5 774 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 INO80CQ6PI98 192 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 PIGZQ86VD9 579 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 OR14C36Q8NHC7 312 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 DEPDC7Q96QD5 511 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 FAM129BQ96TA1 746 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 UBXN6Q9BZV1 441 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 DMAC2Q9NW81 257 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 ARHGAP20Q9P2F6 1191 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 SFMBT1Q9UHJ3 866 aa13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 INTS6Q9UL03 887 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 TPX2Q9ULW0 747 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 HBS1LQ9Y450 684 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 MORC2Q9Y6X9 1032 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 TEP1Q99973 2627 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-213ENST00000560127 A0A1B0GVM2 712 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 VPS37CA5D8V6 355 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 TBL1XO60907 577 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 LATS1O95835 1130 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 SLFN14P0C7P3 912 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 SYT1P21579 422 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 CSKP41240 450 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 PIK3CAP42336 1068 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 PSMD8P48556 350 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 ST8SIA6P61647 398 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 SKOR1P84550 965 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 MPP7Q5T2T1 576 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 PIK3R6Q5UE93 754 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 PM20D1Q6GTS8 502 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 UNC13DQ70J99 1090 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 SND1Q7KZF4 910 aaKnown RBP eCLIP13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 IQCHQ86VS3 1027 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 C7orf25Q9BPX7 421 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 ULBP1Q9BZM6 244 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 CYP3A43Q9HB55 503 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 SLC39A2Q9NP94 309 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 THSD1Q9NS62 852 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 UCKL1Q9NWZ5 548 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 MTMR6Q9Y217 621 aa13.3□□□□□ -0.28
RABGGTA-213ENST00000560127 UNC13CQ8NB66 2214 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 CREBBPQ92793 2442 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 TBC1D3DA0A087WVF3 549 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 TBC1D3IA0A087WXS9 549 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 TBC1D3EA0A087X179 549 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 TBC1D3KA0A087X1G2 549 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms