RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 INAVAQ3KP66 663 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 FAM182AQ5T1J6 154 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 RALGPS2Q86X27 583 aaPredicted RBP19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 ANKRD13BQ86YJ7 626 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 RHPN2Q8IUC4 686 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 SIAH1Q8IUQ4 282 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 LSMEM1Q8N8F7 131 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 FBXO36Q8NEA4 188 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 ZNF347Q96SE7 839 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 PLLPQ9Y342 182 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 TRIM64BA6NI03 449 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 M0QX08 132 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 RNASEH2AO75792 299 aaKnown RBP19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 GRM5P41594 1212 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 DCP2Q8IU60 420 aaKnown RBP19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 FAM151AQ8WW52 585 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 COQ7Q99807 217 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 TRIT1Q9H3H1 467 aaKnown RBP19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 RMND5AQ9H871 391 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 KLQ9UEF7 1012 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 DNPEPQ9ULA0 475 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 SYCE1LA8MT33 242 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 FZD9O00144 591 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 CCRL2O00421 344 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 NUAK1O60285 661 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 GCNT3O95395 438 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 GAD2Q05329 585 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 KCNA1Q09470 495 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 C15orf59Q2T9L4 293 aaPredicted RBP19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 CDONQ4KMG0 1287 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 TATDN1Q6P1N9 297 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 ANKRD60Q9BZ19 345 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 NOL6Q9H6R4 1146 aaKnown RBP19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 POLR1BQ9H9Y6 1135 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 PTBP2Q9UKA9 531 aaKnown RBP19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 ALX3O95076 343 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 OPRL1P41146 370 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 SNAP25P60880 206 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 MSS51Q4VC12 460 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 LSMEM2Q8N112 164 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 DLG3Q92796 817 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 C2orf49Q9BVC5 232 aaPredicted RBP19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 RUSC1Q9BVN2 902 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 NANOGQ9H9S0 305 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 TXNDC16Q9P2K2 825 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 GOLGA8QA0A0J9YX86 632 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 GOLGA8OA6NCC3 632 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 CLDN25C9JDP6 229 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 GOLGA8NF8WBI6 632 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 AP3B1O00203 1094 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 HOXC11O43248 304 aaPredicted RBP19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 BMP3P12645 472 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 FGFR3P22607 806 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 RFX1P22670 979 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 RALGDSQ12967 914 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 FNBP1LQ5T0N5 605 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 C16orf46Q6P387 395 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 UBE2Q1Q7Z7E8 422 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 PDCD6IPQ8WUM4 868 aaKnown RBP19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 SLC13A1Q9BZW2 595 aa19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 PRPF19Q9UMS4 504 aaKnown RBP19.6■□□□□ 0.73
SEMA4B-215ENST00000560089 PLIN4Q96Q06 1357 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 LIASO43766 372 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 YBX3P16989 372 aaKnown RBP eCLIP19.59■□□□□ 0.733e-6■□□□□ 10.1
SEMA4B-215ENST00000560089 TGM1P22735 817 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 GJC1P36383 396 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 GRIA3P42263 894 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 ECE1P42892 770 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 MLLT10P55197 1068 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 P2RX3P56373 397 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 CTAG1AP78358 180 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 TRPC3Q13507 836 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 HYIQ5T013 277 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 PHTF2Q8N3S3 785 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 PIWIL2Q8TC59 973 aaKnown RBP19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 RTKNQ9BST9 563 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 STN1Q9H668 368 aaKnown RBP19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 TMEM9Q9P0T7 183 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 DNMT3BQ9UBC3 853 aaKnown RBP19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 PCDHA12Q9UN75 941 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 SCO2O43819 266 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 NOVP48745 357 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 GNG2P59768 71 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 CARTPTQ16568 116 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 FSCBQ5H9T9 825 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 TJAP1Q5JTD0 557 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 DLK2Q6UY11 383 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 SNX29P2Q8IUI4 249 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 EPS8L1Q8TE68 723 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 CCDC17Q96LX7 622 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 IKZF4Q9H2S9 585 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 SLC27A5Q9Y2P5 690 aa19.59■□□□□ 0.73
SEMA4B-215ENST00000560089 AIM2O14862 343 aa19.58■□□□□ 0.73
SEMA4B-215ENST00000560089 GCATO75600 419 aa19.58■□□□□ 0.73
SEMA4B-215ENST00000560089 TOM1L1O75674 476 aa19.58■□□□□ 0.73
SEMA4B-215ENST00000560089 IFNB1P01574 187 aa19.58■□□□□ 0.73
SEMA4B-215ENST00000560089 NUDT2P50583 147 aa19.58■□□□□ 0.73
SEMA4B-215ENST00000560089 SLC12A3P55017 1021 aa19.58■□□□□ 0.73
SEMA4B-215ENST00000560089 UBE2UQ5VVX9 321 aa19.58■□□□□ 0.73
SEMA4B-215ENST00000560089 PDPRQ8NCN5 879 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms