RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 CER1O95813 267 aa21.4■■□□□ 1.02
PSEN1-225ENST00000560005 CST3P01034 146 aaPredicted RBP21.4■■□□□ 1.02
PSEN1-225ENST00000560005 ZNF883P0CG24 379 aa21.4■■□□□ 1.02
PSEN1-225ENST00000560005 MATKP42679 507 aa21.4■■□□□ 1.02
PSEN1-225ENST00000560005 SLC5A3P53794 718 aa21.4■■□□□ 1.02
PSEN1-225ENST00000560005 TNNC1P63316 161 aa21.4■■□□□ 1.02
PSEN1-225ENST00000560005 PTK2Q05397 1052 aa21.4■■□□□ 1.02
PSEN1-225ENST00000560005 CUL2Q13617 745 aa21.4■■□□□ 1.02
PSEN1-225ENST00000560005 NYAP1Q6ZVC0 841 aa21.4■■□□□ 1.02
PSEN1-225ENST00000560005 KREMEN1Q96MU8 473 aa21.4■■□□□ 1.02
PSEN1-225ENST00000560005 VRTNQ9H8Y1 702 aa21.4■■□□□ 1.02
PSEN1-225ENST00000560005 WSB2Q9NYS7 404 aaPredicted RBP21.4■■□□□ 1.02
PSEN1-225ENST00000560005 AJAP1Q9UKB5 411 aaPredicted RBP21.4■■□□□ 1.02
PSEN1-225ENST00000560005 USP27XA6NNY8 438 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 GFRA2O00451 464 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 GREM1O60565 184 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 DKK1O94907 266 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 PLEKP08567 350 aaPredicted RBP21.39■■□□□ 1.01
PSEN1-225ENST00000560005 ZDHHC11BP0C7U3 371 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 TNNT1P13805 278 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 TNFAIP3P21580 790 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 USP8P40818 1118 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 MAGEA1P43355 309 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 VAV2P52735 878 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 BNC1Q01954 994 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 KIF5AQ12840 1032 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 HLA-BQ31612 363 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 ZNF699Q32M78 642 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 WDR72Q3MJ13 1102 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 ZNF667Q5HYK9 610 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 DCAF12L1Q5VU92 463 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 ZNF677Q86XU0 584 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 ACRBPQ8NEB7 543 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 RHBDD1Q8TEB9 315 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 CDC6Q99741 560 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 NIF3L1Q9GZT8 377 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 MARK1Q9P0L2 795 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 USP36Q9P275 1121 aaKnown RBP21.39■■□□□ 1.01
PSEN1-225ENST00000560005 WDR35Q9P2L0 1181 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 PCDHA13Q9Y5I0 950 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 KNL1Q8NG31 2342 aa21.39■■□□□ 1.01
PSEN1-225ENST00000560005 A0A087WV48 116 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 BCAT2O15382 392 aaPredicted RBP21.38■■□□□ 1.01
PSEN1-225ENST00000560005 KIF5CO60282 957 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 TLR5O60602 858 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 PRB1P04280 392 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 FAM163BP0C2L3 166 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 DGKGP49619 791 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 PGFP49763 221 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 MYL6P60660 151 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 STARD3Q14849 445 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 FUT11Q495W5 492 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 IL27RAQ6UWB1 636 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 HTR3DQ70Z44 454 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 ZNF571Q7Z3V5 609 aaPredicted RBP21.38■■□□□ 1.01
PSEN1-225ENST00000560005 FAM35AQ86V20 835 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 CADM4Q8NFZ8 388 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 MED10Q9BTT4 135 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 IL37Q9NZH6 218 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 ADAMTS1Q9UHI8 967 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 INTUQ9ULD6 942 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 STON1Q9Y6Q2 735 aa21.38■■□□□ 1.01
PSEN1-225ENST00000560005 FAM149AA5PLN7 773 aa21.37■■□□□ 1.01
PSEN1-225ENST00000560005 FLRT2O43155 660 aa21.37■■□□□ 1.01
PSEN1-225ENST00000560005 TBX18O95935 607 aa21.37■■□□□ 1.01
PSEN1-225ENST00000560005 CISD3P0C7P0 127 aa21.37■■□□□ 1.01
PSEN1-225ENST00000560005 PPP1R2P3Q6NXS1 205 aa21.37■■□□□ 1.01
PSEN1-225ENST00000560005 METTL3Q86U44 580 aaKnown RBP21.37■■□□□ 1.01
PSEN1-225ENST00000560005 SCUBE3Q8IX30 993 aa21.37■■□□□ 1.01
PSEN1-225ENST00000560005 GALNT15Q8N3T1 639 aa21.37■■□□□ 1.01
PSEN1-225ENST00000560005 BHMTQ93088 406 aa21.37■■□□□ 1.01
PSEN1-225ENST00000560005 C16orf45Q96MC5 204 aaPredicted RBP21.37■■□□□ 1.01
PSEN1-225ENST00000560005 AGPAT1Q99943 283 aa21.37■■□□□ 1.01
PSEN1-225ENST00000560005 MKRN2Q9H000 416 aaKnown RBP21.37■■□□□ 1.01
PSEN1-225ENST00000560005 CYP3A43Q9HB55 503 aa21.37■■□□□ 1.01
PSEN1-225ENST00000560005 DMAP1Q9NPF5 467 aaPredicted RBP21.37■■□□□ 1.01
PSEN1-225ENST00000560005 ITM2CQ9NQX7 267 aa21.37■■□□□ 1.01
PSEN1-225ENST00000560005 NXF1Q9UBU9 619 aaKnown RBP21.37■■□□□ 1.01
PSEN1-225ENST00000560005 CNTN6Q9UQ52 1028 aa21.37■■□□□ 1.01
PSEN1-225ENST00000560005 CABIN1Q9Y6J0 2220 aa21.36■■□□□ 1.01
PSEN1-225ENST00000560005 FAM92AA1XBS5 289 aa21.36■■□□□ 1.01
PSEN1-225ENST00000560005 PJA2O43164 708 aa21.36■■□□□ 1.01
PSEN1-225ENST00000560005 KRT5P13647 590 aa21.36■■□□□ 1.01
PSEN1-225ENST00000560005 ETF1P62495 437 aaKnown RBP21.36■■□□□ 1.01
PSEN1-225ENST00000560005 C19orf57Q0VDD7 668 aa21.36■■□□□ 1.01
PSEN1-225ENST00000560005 CAMK2BQ13554 666 aa21.36■■□□□ 1.01
PSEN1-225ENST00000560005 CCDC122Q5T0U0 273 aa21.36■■□□□ 1.01
PSEN1-225ENST00000560005 DBX2Q6ZNG2 339 aa21.36■■□□□ 1.01
PSEN1-225ENST00000560005 PAQR9Q6ZVX9 377 aa21.36■■□□□ 1.01
PSEN1-225ENST00000560005 KIF18AQ8NI77 898 aa21.36■■□□□ 1.01
PSEN1-225ENST00000560005 KLF16Q9BXK1 252 aaPredicted RBP21.36■■□□□ 1.01
PSEN1-225ENST00000560005 DNAI2Q9GZS0 605 aa21.36■■□□□ 1.01
PSEN1-225ENST00000560005 APOBEC3GQ9HC16 384 aaKnown RBP21.36■■□□□ 1.01
PSEN1-225ENST00000560005 EIF2B4Q9UI10 523 aaKnown RBP21.36■■□□□ 1.01
PSEN1-225ENST00000560005 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.36■■□□□ 1.01
PSEN1-225ENST00000560005 BTBD3Q9Y2F9 522 aa21.36■■□□□ 1.01
PSEN1-225ENST00000560005 PAXBP1Q9Y5B6 917 aa21.36■■□□□ 1.01
PSEN1-225ENST00000560005 PCDHGB2Q9Y5G2 931 aa21.36■■□□□ 1.01
PSEN1-225ENST00000560005 A0A087X0T9 212 aa21.35■■□□□ 1.01
PSEN1-225ENST00000560005 A0A1B0GVT2 93 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms