RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ISL2Q96A47 359 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 E2F7Q96AV8 911 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 PCED1BQ96HM7 432 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 TSGA13Q96PP4 275 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 PPP1R2P1Q96PQ5 205 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 GAD1Q99259 594 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 LGMNQ99538 433 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 BEGAINQ9BUH8 593 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 MAGEB5Q9BZ81 275 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 OSBPL2Q9H1P3 480 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 GBA3Q9H227 469 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 FAM96AQ9H5X1 160 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 NPHS2Q9NP85 383 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 DMAP1Q9NPF5 467 aaPredicted RBP8.31□□□□□ -1.08
SMAD3-212ENST00000559937 RNF19AQ9NV58 838 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 BAIAP2L1Q9UHR4 511 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 GGT7Q9UJ14 662 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 ZFP69BQ9UJL9 534 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 MFHAS1Q9Y4C4 1052 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 NYNRINQ9P2P1 1898 aaKnown RBP8.3□□□□□ -1.08
SMAD3-212ENST00000559937 THSD7BQ9C0I4 1608 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 MAGEB16A2A368 324 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 WDR27A2RRH5 827 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 MYBPHLA2RUH7 354 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 WDR91A4D1P6 747 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 MYADML2A6NDP7 307 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 SEPT4O43236 478 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 PIAS1O75925 651 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 HAUS5O94927 633 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 CHRNA1P02708 482 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 BPGMP07738 259 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 KRT16P08779 473 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 NCAM1P13591 858 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 EZRP15311 586 aaKnown RBP8.3□□□□□ -1.08
SMAD3-212ENST00000559937 BGNP21810 368 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 CCND1P24385 295 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 PTPN3P26045 913 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 MGAT1P26572 445 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 GP5P40197 560 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 NPY2RP49146 381 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 SCNN1GP51170 649 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 FCGRTP55899 365 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 OCRLQ01968 901 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 NME3Q13232 169 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 NOGQ13253 232 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 TUSC3Q13454 348 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 CRYMQ14894 314 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 KRT72Q14CN4 511 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 TIGD5Q53EQ6 642 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 SYCP2LQ5T4T6 812 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 GRTP1Q5TC63 336 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 KCTD11Q693B1 232 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 TRMT10BQ6PF06 316 aaKnown RBP8.3□□□□□ -1.08
SMAD3-212ENST00000559937 PID1Q7Z2X4 250 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 CLNKQ7Z7G1 428 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 NDUFAF2Q8N183 169 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMAD3-212ENST00000559937 CCNYQ8ND76 341 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 STKLD1Q8NE28 680 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 NDRG1Q92597 394 aaKnown RBP8.3□□□□□ -1.08
SMAD3-212ENST00000559937 PTPRN2Q92932 1015 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 ATP2A3Q93084 1043 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 MYLPFQ96A32 169 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 SKA1Q96BD8 255 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 SLC7A6OSQ96CW6 309 aaPredicted RBP8.3□□□□□ -1.08
SMAD3-212ENST00000559937 SUSD3Q96L08 255 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 ZIC5Q96T25 663 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 PKMYT1Q99640 499 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 CPNE1Q99829 537 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 COLEC11Q9BWP8 271 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 STN1Q9H668 368 aaKnown RBP8.3□□□□□ -1.08
SMAD3-212ENST00000559937 LRRC40Q9H9A6 602 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 CASS4Q9NQ75 786 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 DDIT4Q9NX09 232 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 MIOSQ9NXC5 875 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 KCNK4Q9NYG8 393 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 BFARQ9NZS9 450 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 KLHL8Q9P2G9 620 aaPredicted RBP8.3□□□□□ -1.08
SMAD3-212ENST00000559937 KANSL3Q9P2N6 904 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 DCDC2Q9UHG0 476 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 MYLKQ15746 1914 aa8.3□□□□□ -1.08
SMAD3-212ENST00000559937 GREB1Q4ZG55 1949 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 A0A0U1RQF3 1178 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 FAM237BA0A1B0GVD1 139 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 HMX2A2RU54 273 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 MEIS3P2A8K0S8 358 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 FAM155AB1AL88 458 aaPredicted RBP8.29□□□□□ -1.08
SMAD3-212ENST00000559937 FGF10O15520 208 aaPredicted RBP8.29□□□□□ -1.08
SMAD3-212ENST00000559937 CA12O43570 354 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 UGT1A9O60656 530 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 ADAMTS4O75173 837 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 SNNO75324 88 aaPredicted RBP8.29□□□□□ -1.08
SMAD3-212ENST00000559937 CABYRO75952 493 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 USP1O94782 785 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 IGLV3-25P01717 112 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 DLDP09622 509 aaKnown RBP8.29□□□□□ -1.08
SMAD3-212ENST00000559937 USP17L7P0C7H9 530 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 T-ENOLP0DO92 83 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 HOXC13P31276 330 aa8.29□□□□□ -1.08
SMAD3-212ENST00000559937 SPRP35270 261 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms