RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 Q6ZNB5 142 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 CHSY1Q86X52 802 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 ITFG1Q8TB96 612 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 CATSPERBQ9H7T0 1116 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 WASH4PA8MWX3 477 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 MCF2LO15068 1137 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 TTI1O43156 1089 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 MFSD11O43934 449 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 ITGAVP06756 1048 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 HTR3DQ70Z44 454 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 BZW1Q7L1Q6 419 aaKnown RBP12.55□□□□□ -0.4
HERC1-205ENST00000559886 GPR161Q8N6U8 529 aaKnown RBP12.55□□□□□ -0.4
HERC1-205ENST00000559886 GRK7Q8WTQ7 553 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 IGSF8Q969P0 613 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 OLFM3Q96PB7 478 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 ZYG11BQ9C0D3 744 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 EPC1Q9H2F5 836 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 ANKZF1Q9H8Y5 726 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 MPP6Q9NZW5 540 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 UQCRHLA0A096LP55 91 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 TARSL2A2RTX5 802 aaKnown RBP12.55□□□□□ -0.4
HERC1-205ENST00000559886 F5H5T6 163 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 LEFTY2O00292 366 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 UQCRHP07919 91 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 RBP3P10745 1247 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 RHOQP17081 205 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 SLC7A5Q01650 507 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 LMNB2Q03252 620 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 XRCC4Q13426 336 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 ADGRE1Q14246 886 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 ELF2Q15723 593 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 CTC1Q2NKJ3 1217 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 POTEHQ6S545 545 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 NLRP14Q86W24 1093 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 DDX42Q86XP3 938 aaKnown RBP eCLIP12.55□□□□□ -0.4
HERC1-205ENST00000559886 NPWQ8N729 165 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 RTL3Q8N8U3 475 aaKnown RBP12.55□□□□□ -0.4
HERC1-205ENST00000559886 ING5Q8WYH8 240 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 ZSWIM3Q96MP5 696 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 DDX50Q9BQ39 737 aaKnown RBP12.55□□□□□ -0.4
HERC1-205ENST00000559886 SMG9Q9H0W8 520 aaKnown RBP12.55□□□□□ -0.4
HERC1-205ENST00000559886 TDP1Q9NUW8 608 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 CFAP97Q9P2B7 532 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 DMGDHQ9UI17 866 aaKnown RBP12.55□□□□□ -0.4
HERC1-205ENST00000559886 LSM7Q9UK45 103 aaKnown RBP12.55□□□□□ -0.4
HERC1-205ENST00000559886 ZNF148Q9UQR1 794 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 RAD54BQ9Y620 910 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 CHD5Q8TDI0 1954 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 SHROOM3Q8TF72 1996 aa12.55□□□□□ -0.4
HERC1-205ENST00000559886 FAM187AA6NFU0 413 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 SOX1O00570 391 aaPredicted RBP12.54□□□□□ -0.4
HERC1-205ENST00000559886 ECEL1O95672 775 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 SERPINB6P35237 376 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 IRAK1P51617 712 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 RFWD3Q6PCD5 774 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 ZC3H18Q86VM9 953 aaKnown RBP12.54□□□□□ -0.4
HERC1-205ENST00000559886 JAMLQ86YT9 394 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 FAM217AQ8IXS0 508 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 LGI2Q8N0V4 545 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 LZTR1Q8N653 840 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 USP13Q92995 863 aaPredicted RBP12.54□□□□□ -0.4
HERC1-205ENST00000559886 MYEOVQ96EZ4 313 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 CCDC114Q96M63 670 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 RPRD1AQ96P16 312 aaPredicted RBP12.54□□□□□ -0.4
HERC1-205ENST00000559886 APOL5Q9BWW9 433 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 KLC2Q9H0B6 622 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 CLEC1BQ9P126 229 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 CCL26Q9Y258 94 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 ZNF510Q9Y2H8 683 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 SH3BP1Q9Y3L3 701 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 MAP3K6O95382 1288 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 WEE1P30291 646 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 CBX2Q14781 532 aaPredicted RBP12.54□□□□□ -0.4
HERC1-205ENST00000559886 ALFQ53S48 1182 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 ALLCQ8N6M5 410 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 SH3RF2Q8TEC5 729 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 TMEM121Q9BTD3 319 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 ADAM7Q9H2U9 754 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 RETREG1Q9H6L5 497 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 TMEM248Q9NWD8 314 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 DONSONQ9NYP3 566 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 ZNF212Q9UDV6 495 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 NEU2Q9Y3R4 380 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 DOCK8Q8NF50 2099 aa12.54□□□□□ -0.4
HERC1-205ENST00000559886 E2F8A0AVK6 867 aa12.53□□□□□ -0.4
HERC1-205ENST00000559886 GFRA2O00451 464 aa12.53□□□□□ -0.4
HERC1-205ENST00000559886 CNTN5O94779 1100 aa12.53□□□□□ -0.4
HERC1-205ENST00000559886 HEXIM1O94992 359 aaKnown RBP12.53□□□□□ -0.4
HERC1-205ENST00000559886 GAS8O95995 478 aa12.53□□□□□ -0.4
HERC1-205ENST00000559886 TCF3P15923 654 aa12.53□□□□□ -0.4
HERC1-205ENST00000559886 FSHRP23945 695 aa12.53□□□□□ -0.4
HERC1-205ENST00000559886 COL19A1Q14993 1142 aa12.53□□□□□ -0.4
HERC1-205ENST00000559886 SYDE1Q6ZW31 735 aaPredicted RBP12.53□□□□□ -0.4
HERC1-205ENST00000559886 PRICKLE1Q96MT3 831 aaPredicted RBP12.53□□□□□ -0.4
HERC1-205ENST00000559886 S1PR5Q9H228 398 aa12.53□□□□□ -0.4
HERC1-205ENST00000559886 NDFIP2Q9NV92 336 aa12.53□□□□□ -0.4
HERC1-205ENST00000559886 BRWD1Q9NSI6 2320 aa12.53□□□□□ -0.4
HERC1-205ENST00000559886 NYNRINQ9P2P1 1898 aaKnown RBP12.53□□□□□ -0.4
HERC1-205ENST00000559886 BCLAF3A2AJT9 711 aaKnown RBP12.53□□□□□ -0.4
HERC1-205ENST00000559886 BHMG1C9JSJ3 638 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms