RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 ERLIN2O94905 339 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 MYBP10242 640 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 MLH1P40692 756 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 MEOX1P50221 254 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 PHC1P78364 1004 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 HMGN5P82970 282 aaKnown RBP6.53□□□□□ -1.36
CRNDE-207ENST00000559598 NFKB2Q00653 900 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 DRP2Q13474 957 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 NOLC1Q14978 699 aaKnown RBP eCLIP6.53□□□□□ -1.367e-8■■■■□ 24.9
CRNDE-207ENST00000559598 PSMD5Q16401 504 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 PRR16Q569H4 304 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 STPG1Q5TH74 334 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 AGBL4Q5VU57 503 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 EGFLAMQ63HQ2 1017 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 TIGD7Q6NT04 549 aaPredicted RBP6.53□□□□□ -1.36
CRNDE-207ENST00000559598 SYNE3Q6ZMZ3 975 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 LIMS2Q7Z4I7 341 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 FILIP1Q7Z7B0 1213 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 C11orf74Q86VG3 221 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 WDR5BQ86VZ2 330 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 MICU3Q86XE3 530 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 OR5AN1Q8NGI8 311 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 ITFG1Q8TB96 612 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 DEPDC1BQ8WUY9 529 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 PPP1R9BQ96SB3 815 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 CEP89Q96ST8 783 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 TTPALQ9BTX7 342 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 TRMT61BQ9BVS5 477 aaKnown RBP6.53□□□□□ -1.36
CRNDE-207ENST00000559598 TEKT3Q9BXF9 490 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 POFUT1Q9H488 388 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 CAAP1Q9H8G2 361 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 SEC61A2Q9H9S3 476 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 IFT122Q9HBG6 1241 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 ZFP14Q9HCL3 533 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 EMC7Q9NPA0 242 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 COL4A3BPQ9Y5P4 624 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 PCNX2A6NKB5 2137 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 NUP210Q8TEM1 1887 aaPredicted RBP6.53□□□□□ -1.36
CRNDE-207ENST00000559598 LAMA1P25391 3075 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 ACACAQ13085 2346 aa6.53□□□□□ -1.36
CRNDE-207ENST00000559598 GCN1Q92616 2671 aaKnown RBP6.53□□□□□ -1.36
CRNDE-207ENST00000559598 DSPP15924 2871 aaKnown RBP6.52□□□□□ -1.37
CRNDE-207ENST00000559598 ASCC3Q8N3C0 2202 aaKnown RBP6.52□□□□□ -1.37
CRNDE-207ENST00000559598 SHISA7A6NL88 538 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 SRRM3A6NNA2 597 aaPredicted RBP6.52□□□□□ -1.37
CRNDE-207ENST00000559598 TAF4O00268 1085 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 ZNF197O14709 1029 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 CCL16O15467 120 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 ASAP2O43150 1006 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 DKC1O60832 514 aaKnown RBP eCLIP6.52□□□□□ -1.37
CRNDE-207ENST00000559598 TADA2AO75478 443 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 APOL3O95236 402 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 BPIP17213 487 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 RPL17P18621 184 aaKnown RBP6.52□□□□□ -1.37
CRNDE-207ENST00000559598 RXRAP19793 462 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 GNA11P29992 359 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 HOXA11P31270 313 aaPredicted RBP6.52□□□□□ -1.37
CRNDE-207ENST00000559598 SOX5P35711 763 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 SCNN1GP51170 649 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 RCAN1P53805 252 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 NTHL1P78549 312 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 SATB1Q01826 763 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 ADCY2Q08462 1091 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 DMTNQ08495 405 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 PCOLCEQ15113 449 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 TERF2Q15554 542 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 UGCGQ16739 394 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 RNF151Q2KHN1 245 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 DGKKQ5KSL6 1271 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 DAB2IPQ5VWQ8 1189 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 USP30Q70CQ3 517 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 KANSL1Q7Z3B3 1105 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 CACNA2D4Q7Z3S7 1137 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 SGMS1Q86VZ5 419 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 CHD1LQ86WJ1 897 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 SMC5Q8IY18 1101 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 UBR7Q8N806 425 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 BICD2Q8TD16 824 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 CHAC2Q8WUX2 184 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 PSPC1Q8WXF1 523 aaKnown RBP6.52□□□□□ -1.37
CRNDE-207ENST00000559598 USP7Q93009 1102 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 LENG9Q96B70 501 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 GAD1Q99259 594 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 CLSTN3Q9BQT9 956 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 APOL6Q9BWW8 343 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 TRIM6Q9C030 488 aaPredicted RBP6.52□□□□□ -1.37
CRNDE-207ENST00000559598 IL25Q9H293 177 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 LMAN1LQ9HAT1 526 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 C6orf50Q9HD87 102 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 VPS45Q9NRW7 570 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 KCMF1Q9P0J7 381 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 USP36Q9P275 1121 aaKnown RBP6.52□□□□□ -1.37
CRNDE-207ENST00000559598 SAE1Q9UBE0 346 aaPredicted RBP6.52□□□□□ -1.37
CRNDE-207ENST00000559598 IPPQ9Y573 584 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 PIAS3Q9Y6X2 628 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 LAMA5O15230 3695 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 HELZ2Q9BYK8 2649 aaKnown RBP6.52□□□□□ -1.37
CRNDE-207ENST00000559598 DMXL2Q8TDJ6 3036 aa6.52□□□□□ -1.37
CRNDE-207ENST00000559598 ASH1LQ9NR48 2969 aaKnown RBP6.51□□□□□ -1.37
CRNDE-207ENST00000559598 TRIP11Q15643 1979 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms