RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 MBLAC2Q68D91 279 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 ARMCX6Q7L4S7 300 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 APTXQ7Z2E3 356 aaKnown RBP13.03□□□□□ -0.32
LRRC28-214ENST00000559433 KIAA0907Q7Z7F0 614 aaPredicted RBP13.03□□□□□ -0.32
LRRC28-214ENST00000559433 ADIPOR2Q86V24 386 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 XYLT1Q86Y38 959 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 FIBINQ8TAL6 211 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 MRGPRX1Q96LB2 322 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 ERGIC2Q96RQ1 377 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 BPIFA3Q9BQP9 254 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.03□□□□□ -0.32
LRRC28-214ENST00000559433 STAP1Q9ULZ2 295 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 CYP8B1Q9UNU6 501 aa13.03□□□□□ -0.32
LRRC28-214ENST00000559433 DNAH14Q0VDD8 3507 aa13.02□□□□□ -0.32
LRRC28-214ENST00000559433 IGHV1OR15-9A0A0B4J2B8 117 aa13.02□□□□□ -0.33
LRRC28-214ENST00000559433 LRRC10BA6NIK2 292 aa13.02□□□□□ -0.33
LRRC28-214ENST00000559433 SMTNL1A8MU46 457 aa13.02□□□□□ -0.33
LRRC28-214ENST00000559433 H0Y626 953 aa13.02□□□□□ -0.33
LRRC28-214ENST00000559433 GOLGA8SH3BPF8 625 aa13.02□□□□□ -0.33
LRRC28-214ENST00000559433 SLC30A4O14863 429 aa13.02□□□□□ -0.33
LRRC28-214ENST00000559433 ATP5BP06576 529 aaKnown RBP13.02□□□□□ -0.33
LRRC28-214ENST00000559433 HLA-EP13747 358 aa13.02□□□□□ -0.33
LRRC28-214ENST00000559433 SCNN1AP37088 669 aa13.02□□□□□ -0.33
LRRC28-214ENST00000559433 SULT1E1P49888 294 aa13.02□□□□□ -0.33
LRRC28-214ENST00000559433 FMO1Q01740 532 aa13.02□□□□□ -0.33
LRRC28-214ENST00000559433 LMAN2Q12907 356 aa13.02□□□□□ -0.33
LRRC28-214ENST00000559433 LYSMD4Q5XG99 296 aa13.02□□□□□ -0.33
LRRC28-214ENST00000559433 DHX40Q8IX18 779 aaKnown RBP13.02□□□□□ -0.33
LRRC28-214ENST00000559433 PRMT1Q99873 361 aaKnown RBP13.02□□□□□ -0.33
LRRC28-214ENST00000559433 NUSAP1Q9BXS6 441 aaKnown RBP13.02□□□□□ -0.33
LRRC28-214ENST00000559433 PRDM16Q9HAZ2 1276 aa13.02□□□□□ -0.33
LRRC28-214ENST00000559433 RRN3Q9NYV6 651 aa13.02□□□□□ -0.33
LRRC28-214ENST00000559433 DLDP09622 509 aaKnown RBP13.01□□□□□ -0.33
LRRC28-214ENST00000559433 CHRNB2P17787 502 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 TFE3P19532 575 aaPredicted RBP13.01□□□□□ -0.33
LRRC28-214ENST00000559433 CSKP41240 450 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 PTGER3P43115 390 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 ZNF165P49910 485 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 ST8SIA6P61647 398 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 MTA1Q13330 715 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 PTPRNQ16849 979 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 KLHL40Q2TBA0 621 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 FSCBQ5H9T9 825 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 RABGAP1LQ5R372 815 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 SYCP2LQ5T4T6 812 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 STPG1Q5TH74 334 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 TTC39BQ5VTQ0 682 aaPredicted RBP13.01□□□□□ -0.33
LRRC28-214ENST00000559433 OTUD1Q5VV17 481 aaPredicted RBP13.01□□□□□ -0.33
LRRC28-214ENST00000559433 TCEAL6Q6IPX3 200 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 TRIM72Q6ZMU5 477 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 MMS22LQ6ZRQ5 1243 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 SND1Q7KZF4 910 aaKnown RBP eCLIP13.01□□□□□ -0.33
LRRC28-214ENST00000559433 CIR1Q86X95 450 aaPredicted RBP13.01□□□□□ -0.33
LRRC28-214ENST00000559433 CACUL1Q86Y37 369 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 SYT12Q8IV01 421 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 DEFB119Q8N690 84 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 ZNF366Q8N895 744 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 PRCCQ92733 491 aaPredicted RBP13.01□□□□□ -0.33
LRRC28-214ENST00000559433 TCEAL3Q969E4 200 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 LMLNQ96KR4 655 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 RPRD1AQ96P16 312 aaPredicted RBP13.01□□□□□ -0.33
LRRC28-214ENST00000559433 NPY6RQ99463 290 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 MKRN2Q9H000 416 aaKnown RBP13.01□□□□□ -0.33
LRRC28-214ENST00000559433 CD93Q9NPY3 652 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 PIGVQ9NUD9 493 aa13.01□□□□□ -0.33
LRRC28-214ENST00000559433 PI4KAP42356 2102 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 ATXN2Q99700 1313 aaKnown RBP13□□□□□ -0.33
LRRC28-214ENST00000559433 PAGE1O75459 146 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 MOCS3O95396 460 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 ASLP04424 464 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 CYP1A1P04798 512 aaPredicted RBP13□□□□□ -0.33
LRRC28-214ENST00000559433 OXTRP30559 389 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 FLT3P36888 993 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 GGCXP38435 758 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 COPAP53621 1224 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 ATXN3P54252 364 aaPredicted RBP13□□□□□ -0.33
LRRC28-214ENST00000559433 CENPCQ03188 943 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 DEUP1Q05D60 604 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 AUHQ13825 339 aaKnown RBP13□□□□□ -0.33
LRRC28-214ENST00000559433 SLC25A52Q3SY17 297 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 PITRM1Q5JRX3 1037 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 DAB2IPQ5VWQ8 1189 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 FBXL22Q6P050 247 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 RABEPKQ7Z6M1 372 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 TMPRSS6Q8IU80 811 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 RGL4Q8IZJ4 473 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 CCAR2Q8N163 923 aaKnown RBP13□□□□□ -0.33
LRRC28-214ENST00000559433 SLC30A5Q8TAD4 765 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 CEP76Q8TAP6 659 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 TTC17Q96AE7 1141 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 SIPA1Q96FS4 1042 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 TBCBQ99426 244 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 C11orf70Q9BRQ4 267 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 ADAM33Q9BZ11 813 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 TKTL2Q9H0I9 626 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 TMEM245Q9H330 911 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 WDCPQ9H6R7 721 aa13□□□□□ -0.33
LRRC28-214ENST00000559433 METTL5Q9NRN9 209 aaKnown RBP13□□□□□ -0.33
LRRC28-214ENST00000559433 SEPT11Q9NVA2 429 aaKnown RBP13□□□□□ -0.33
LRRC28-214ENST00000559433 KIAA1522Q9P206 1035 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms