RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 DCAF6Q58WW2 860 aa15.47■□□□□ 0.07
LRRC28-213ENST00000559399 PITRM1Q5JRX3 1037 aa15.47■□□□□ 0.07
LRRC28-213ENST00000559399 TMEM110Q86TL2 294 aa15.47■□□□□ 0.07
LRRC28-213ENST00000559399 CHSY1Q86X52 802 aa15.47■□□□□ 0.07
LRRC28-213ENST00000559399 CFAP52Q8N1V2 620 aa15.47■□□□□ 0.07
LRRC28-213ENST00000559399 KDM1BQ8NB78 822 aa15.47■□□□□ 0.07
LRRC28-213ENST00000559399 MYO19Q96H55 970 aa15.47■□□□□ 0.07
LRRC28-213ENST00000559399 RSPH9Q9H1X1 276 aaPredicted RBP15.47■□□□□ 0.07
LRRC28-213ENST00000559399 THAP9Q9H5L6 903 aa15.47■□□□□ 0.07
LRRC28-213ENST00000559399 IL21RQ9HBE5 538 aa15.47■□□□□ 0.07
LRRC28-213ENST00000559399 SGK2Q9HBY8 427 aa15.47■□□□□ 0.07
LRRC28-213ENST00000559399 ACP6Q9NPH0 428 aa15.47■□□□□ 0.07
LRRC28-213ENST00000559399 CYTH4Q9UIA0 394 aa15.47■□□□□ 0.07
LRRC28-213ENST00000559399 XPO7Q9UIA9 1087 aaKnown RBP15.47■□□□□ 0.07
LRRC28-213ENST00000559399 INTS6Q9UL03 887 aaKnown RBP15.47■□□□□ 0.07
LRRC28-213ENST00000559399 SCML1Q9UN30 329 aa15.47■□□□□ 0.07
LRRC28-213ENST00000559399 FNDC3AQ9Y2H6 1198 aaKnown RBP15.47■□□□□ 0.07
LRRC28-213ENST00000559399 A0A1B0GVT2 93 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 RNASEH1O60930 286 aaKnown RBP15.46■□□□□ 0.07
LRRC28-213ENST00000559399 SIN3BO75182 1162 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 FSBPO95073 299 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 MOCS3O95396 460 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 TRUB2O95900 331 aaKnown RBP15.46■□□□□ 0.07
LRRC28-213ENST00000559399 IGLV3-25P01717 112 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 USP8P40818 1118 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 CSNK1EP49674 416 aaKnown RBP15.46■□□□□ 0.07
LRRC28-213ENST00000559399 ARID5BQ14865 1188 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 ZC3H12AQ5D1E8 599 aaKnown RBP15.46■□□□□ 0.07
LRRC28-213ENST00000559399 FSCBQ5H9T9 825 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 RAP1GAP2Q684P5 730 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 GJB7Q6PEY0 223 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 MMS22LQ6ZRQ5 1243 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 USP30Q70CQ3 517 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 RAB44Q7Z6P3 723 aaPredicted RBP15.46■□□□□ 0.07
LRRC28-213ENST00000559399 CREBRFQ8IUR6 639 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 LGI2Q8N0V4 545 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 CHCHD4Q8N4Q1 142 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 GANCQ8TET4 914 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 SETD7Q8WTS6 366 aaKnown RBP15.46■□□□□ 0.07
LRRC28-213ENST00000559399 BIRC7Q96CA5 298 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 BTN2A3PQ96KV6 586 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 MRGPRX3Q96LB0 322 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 CRACR2AQ9BSW2 395 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 PABPC3Q9H361 631 aaKnown RBP15.46■□□□□ 0.07
LRRC28-213ENST00000559399 MTG2Q9H4K7 406 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 TM9SF3Q9HD45 589 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 OSGEPQ9NPF4 335 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 TM7SF3Q9NS93 570 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 KIAA1522Q9P206 1035 aaPredicted RBP15.46■□□□□ 0.07
LRRC28-213ENST00000559399 KIAA1468Q9P260 1216 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 APEX2Q9UBZ4 518 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 PCOLCE2Q9UKZ9 415 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 NCKAP1Q9Y2A7 1128 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 CEP83Q9Y592 693 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 SLCO1B1Q9Y6L6 691 aa15.46■□□□□ 0.07
LRRC28-213ENST00000559399 BECN2A8MW95 431 aa15.45■□□□□ 0.06
LRRC28-213ENST00000559399 F5H5T6 163 aa15.45■□□□□ 0.06
LRRC28-213ENST00000559399 CBFA2T3O75081 653 aa15.45■□□□□ 0.06
LRRC28-213ENST00000559399 SRPRAP08240 638 aaKnown RBP15.45■□□□□ 0.06
LRRC28-213ENST00000559399 FTH1P19P0C7X4 201 aa15.45■□□□□ 0.06
LRRC28-213ENST00000559399 TACR2P21452 398 aa15.45■□□□□ 0.06
LRRC28-213ENST00000559399 CD27P26842 260 aa15.45■□□□□ 0.06
LRRC28-213ENST00000559399 GRIA4P48058 902 aa15.45■□□□□ 0.06
LRRC28-213ENST00000559399 SFSWAPQ12872 951 aaKnown RBP15.45■□□□□ 0.06
LRRC28-213ENST00000559399 KIF19Q2TAC6 998 aa15.45■□□□□ 0.06
LRRC28-213ENST00000559399 RNF219Q5W0B1 726 aaPredicted RBP15.45■□□□□ 0.06
LRRC28-213ENST00000559399 GBP6Q6ZN66 633 aa15.45■□□□□ 0.06
LRRC28-213ENST00000559399 GLRX5Q86SX6 157 aa15.45■□□□□ 0.06
LRRC28-213ENST00000559399 DHX40Q8IX18 779 aaKnown RBP15.45■□□□□ 0.06
LRRC28-213ENST00000559399 ZCCHC14Q8WYQ9 949 aaKnown RBP15.45■□□□□ 0.06
LRRC28-213ENST00000559399 FAM204AQ9H8W3 233 aa15.45■□□□□ 0.06
LRRC28-213ENST00000559399 FBXL12Q9NXK8 326 aa15.45■□□□□ 0.06
LRRC28-213ENST00000559399 ERVW-1Q9UQF0 538 aa15.45■□□□□ 0.06
LRRC28-213ENST00000559399 PCDHGB2Q9Y5G2 931 aa15.45■□□□□ 0.06
LRRC28-213ENST00000559399 TARSL2A2RTX5 802 aaKnown RBP15.44■□□□□ 0.06
LRRC28-213ENST00000559399 GTPBP10A4D1E9 387 aaKnown RBP15.44■□□□□ 0.06
LRRC28-213ENST00000559399 FAM221BA6H8Z2 402 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 FLRT2O43155 660 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 GLI1P08151 1106 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 SLC2A3P11169 496 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 SLC9A1P19634 815 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 CTSOP43234 321 aaPredicted RBP15.44■□□□□ 0.06
LRRC28-213ENST00000559399 UBE2HP62256 183 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 CDK17Q00537 523 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 ECT2LQ008S8 904 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 CST6Q15828 149 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 CAMK4Q16566 473 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 ARHGAP44Q17R89 818 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 EXOC3L4Q17RC7 722 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 C9orf64Q5T6V5 341 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 KIAA0895LQ68EN5 471 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 ATP6V0D2Q8N8Y2 350 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 ADAMTS14Q8WXS8 1223 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 SHC3Q92529 594 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.44■□□□□ 0.06
LRRC28-213ENST00000559399 SLC12A6Q9UHW9 1150 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 APOBEC2Q9Y235 224 aaKnown RBP15.44■□□□□ 0.06
LRRC28-213ENST00000559399 ANKRD6Q9Y2G4 727 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 SNX11Q9Y5W9 270 aa15.44■□□□□ 0.06
LRRC28-213ENST00000559399 MUC22E2RYF6 1773 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms