RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 SLFN11Q7Z7L1 901 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 TMEM105Q8N8V8 129 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 LRRC57Q8N9N7 239 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 NETO2Q8NC67 525 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 HJURPQ8NCD3 748 aaPredicted RBP11.25□□□□□ -0.61
TPM1-217ENST00000559108 CCDC112Q8NEF3 446 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 PJA1Q8NG27 643 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 TPCN2Q8NHX9 752 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 DDI1Q8WTU0 396 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 CD101Q93033 1021 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 TMA16Q96EY4 203 aaKnown RBP11.25□□□□□ -0.61
TPM1-217ENST00000559108 ALG14Q96F25 216 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 P2RY13Q9BPV8 354 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 OSBPL2Q9H1P3 480 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 NOL6Q9H6R4 1146 aaKnown RBP11.25□□□□□ -0.61
TPM1-217ENST00000559108 C8orf33Q9H7E9 229 aaPredicted RBP11.25□□□□□ -0.61
TPM1-217ENST00000559108 PYCARDQ9ULZ3 195 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 AP4E1Q9UPM8 1137 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 PAXBP1Q9Y5B6 917 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 CAPN6Q9Y6Q1 641 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 EML5Q05BV3 1969 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 CKAP5Q14008 2032 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 A0A0A6YYK5 440 aaPredicted RBP11.24□□□□□ -0.61
TPM1-217ENST00000559108 KANSL1LA0AUZ9 987 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 F5H5T6 163 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 MYO1FO00160 1098 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 DLL1O00548 723 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 LUC7L3O95232 432 aaKnown RBP11.24□□□□□ -0.61
TPM1-217ENST00000559108 KAT7O95251 611 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 MOCS3O95396 460 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 DCNP07585 359 aaKnown RBP11.24□□□□□ -0.61
TPM1-217ENST00000559108 COMTP21964 271 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 IL4RP24394 825 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 L1CAMP32004 1257 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 MAN1A1P33908 653 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 PCK1P35558 622 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 GJC1P36383 396 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 NRG1Q02297 640 aaPredicted RBP11.24□□□□□ -0.61
TPM1-217ENST00000559108 LMAN2Q12907 356 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 PIGHQ14442 188 aaPredicted RBP11.24□□□□□ -0.61
TPM1-217ENST00000559108 UBXN2BQ14CS0 331 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 FUT11Q495W5 492 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 SND1Q7KZF4 910 aaKnown RBP eCLIP11.24□□□□□ -0.61
TPM1-217ENST00000559108 TFAP2DQ7Z6R9 452 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 KIAA0907Q7Z7F0 614 aaPredicted RBP11.24□□□□□ -0.61
TPM1-217ENST00000559108 ADIPOR2Q86V24 386 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 NLRP14Q86W24 1093 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 TP53INP2Q8IXH6 220 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 RHOT2Q8IXI1 618 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 APCDD1Q8J025 514 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 CCAR2Q8N163 923 aaKnown RBP11.24□□□□□ -0.61
TPM1-217ENST00000559108 FLCNQ8NFG4 579 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 SORCS1Q8WY21 1168 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 TSC1Q92574 1164 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 C1orf74Q96LT6 269 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 RPRD1AQ96P16 312 aaPredicted RBP11.24□□□□□ -0.61
TPM1-217ENST00000559108 KLC2Q9H0B6 622 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 OR12D3Q9UGF7 316 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 OR51B4Q9Y5P0 310 aa11.24□□□□□ -0.61
TPM1-217ENST00000559108 A0A0A0MRY4 1105 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 MACROD2A1Z1Q3 448 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 C3orf70A6NLC5 250 aaPredicted RBP11.23□□□□□ -0.61
TPM1-217ENST00000559108 FAM170BA6NMN3 283 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 USP27XA6NNY8 438 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 BTNL10A8MVZ5 291 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 GOLGA6L6A8MZA4 724 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 SRGAP2O75044 1071 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 HNRNPLP14866 589 aaKnown RBP eCLIP11.23□□□□□ -0.61
TPM1-217ENST00000559108 GOT1P17174 413 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 MZF1P28698 734 aaPredicted RBP11.23□□□□□ -0.61
TPM1-217ENST00000559108 EIF2DP41214 584 aaKnown RBP11.23□□□□□ -0.61
TPM1-217ENST00000559108 CSKP41240 450 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 CTSOP43234 321 aaPredicted RBP11.23□□□□□ -0.61
TPM1-217ENST00000559108 MMRN1Q13201 1228 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 DPYSL2Q16555 572 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 MPP7Q5T2T1 576 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 ERMARDQ5T6L9 678 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 ZNF852Q6ZMS4 543 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 KIAA1328Q86T90 577 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 CARNMT1Q8N4J0 409 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 NPWQ8N729 165 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.23□□□□□ -0.61
TPM1-217ENST00000559108 TERB1Q8NA31 727 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 FAM71BQ8TC56 605 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 RAPGEF5Q92565 580 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 HSPH1Q92598 858 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 KRT35Q92764 455 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 PNKPQ96T60 521 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 ACOX2Q99424 681 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 PSMB7Q99436 277 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 HERPUD2Q9BSE4 406 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 IRX2Q9BZI1 471 aaPredicted RBP11.23□□□□□ -0.61
TPM1-217ENST00000559108 DHX35Q9H5Z1 703 aaKnown RBP11.23□□□□□ -0.61
TPM1-217ENST00000559108 PCDH18Q9HCL0 1135 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 ARHGEF4Q9NR80 690 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.23□□□□□ -0.61
TPM1-217ENST00000559108 ABCB8Q9NUT2 735 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 ETNK2Q9NVF9 386 aa11.23□□□□□ -0.61
TPM1-217ENST00000559108 CWC15Q9P013 229 aaKnown RBP11.23□□□□□ -0.61
TPM1-217ENST00000559108 SLC27A6Q9Y2P4 619 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms