RNA–Protein interactions for RNA: ENST00000558963.2

AC087516.2-201, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 3,042 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-201ENST00000558963 LSAMPQ13449 338 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 HERC3Q15034 1050 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 CNPY1Q3B7I2 92 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 LIN52Q52LA3 116 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 LDLRAD1Q5T700 205 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 TEDDM1Q5T9Z0 273 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 OTUD1Q5VV17 481 aaPredicted RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 C9orf57Q5W0N0 161 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 KCTD11Q693B1 232 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 PACS1Q6VY07 963 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 ARMCX2Q7L311 632 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 TTC7BQ86TV6 843 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 TRIM50Q86XT4 487 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 PIWIL2Q8TC59 973 aaKnown RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 ACTRT2Q8TDY3 377 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 ATP2A3Q93084 1043 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 FAM161BQ96MY7 647 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 KCTD15Q96SI1 283 aaPredicted RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 FDXACB1Q9BRP7 624 aaPredicted RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 S100A14Q9HCY8 104 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 FNIP2Q9P278 1114 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 SLC7A8Q9UHI5 535 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 TRHDEQ9UKU6 1024 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 APOBEC2Q9Y235 224 aaKnown RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 ANKRD6Q9Y2G4 727 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 WASF2Q9Y6W5 498 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 NLRC5Q86WI3 1866 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 FAM237BA0A1B0GVD1 139 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 A6NJR5 290 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 GABRDO14764 452 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 CA12O43570 354 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 GPR32O75388 356 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 USP1O94782 785 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 METTL18O95568 372 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 KRT19P08727 400 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 COL6A2P12110 1019 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 GSTT1P30711 240 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 NOS2P35228 1153 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 SERPINB5P36952 375 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 GP5P40197 560 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 CCNA1P78396 465 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 SLC10A2Q12908 348 aaPredicted RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 STX3Q13277 289 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 ITGA9Q13797 1035 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 C15orf59Q2T9L4 293 aaPredicted RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 HP1BP3Q5SSJ5 553 aaPredicted RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 CES4AQ5XG92 561 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 HEATR6Q6AI08 1181 aaKnown RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 NOTUMQ6P988 496 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 GALNT7Q86SF2 657 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 ALYREFQ86V81 257 aaKnown RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 WDR75Q8IWA0 830 aaKnown RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 CNTN4Q8IWV2 1026 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 RNF217Q8TC41 542 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 PTCD2Q8WV60 388 aaKnown RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 PIWIL1Q96J94 861 aaKnown RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 TNIP3Q96KP6 325 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 TSGA13Q96PP4 275 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 BTBD9Q96Q07 612 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 TXNRD2Q9NNW7 524 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 CASS4Q9NQ75 786 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 PCMTD2Q9NV79 361 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 SOX13Q9UN79 622 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 PCDHB12Q9Y5F1 795 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 A0A088AWK7 358 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 BTBD19C9JJ37 291 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 ALDOAP04075 364 aaKnown RBP6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 CYP2C18P33260 490 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 GARSP41250 739 aaKnown RBP6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 IRX4P78413 519 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 PPIDQ08752 370 aaKnown RBP6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 PCLAFQ15004 111 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 CA9Q16790 459 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 SOWAHAQ2M3V2 549 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 SV2CQ496J9 727 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 DUSP28Q4G0W2 176 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 PABPC1LQ4VXU2 614 aaKnown RBP6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 RAB41Q5JT25 222 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 MAP3K21Q5TCX8 1036 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 SH3PXD2AQ5TCZ1 1133 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 KCNT2Q6UVM3 1135 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 IZUMO2Q6UXV1 221 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 CAPN12Q6ZSI9 719 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 PDZD4Q76G19 769 aaPredicted RBP6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 NUDCD3Q8IVD9 361 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 CPSF7Q8N684 471 aaKnown RBP6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 PPM1NQ8N819 430 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 IRGQQ8WZA9 623 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 HDAC11Q96DB2 347 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 KIF12Q96FN5 646 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 ZNF385DQ9H6B1 395 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 NRCAMQ92823 1304 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 KAT6AQ92794 2004 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 UPP2O95045 317 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 AP2A1O95782 977 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 IGHA2P01877 340 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 RPLP2P05387 115 aaKnown RBP6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 APRTP07741 180 aa6.62□□□□□ -1.35
AC087516.2-201ENST00000558963 C6orf222P0C671 652 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms