RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 PPM1EQ8WY54 764 aa18.64■□□□□ 0.57
CLPX-203ENST00000558958 RPRD1AQ96P16 312 aaPredicted RBP18.64■□□□□ 0.57
CLPX-203ENST00000558958 LRRC3BQ96PB8 259 aa18.64■□□□□ 0.57
CLPX-203ENST00000558958 AP1M1Q9BXS5 423 aa18.64■□□□□ 0.57
CLPX-203ENST00000558958 ZYG11BQ9C0D3 744 aa18.64■□□□□ 0.57
CLPX-203ENST00000558958 OBP2AQ9NY56 170 aa18.64■□□□□ 0.57
CLPX-203ENST00000558958 DENND4AQ7Z401 1863 aa18.63■□□□□ 0.57
CLPX-203ENST00000558958 KRIT1O00522 736 aa18.63■□□□□ 0.57
CLPX-203ENST00000558958 LAMP2P13473 410 aa18.63■□□□□ 0.57
CLPX-203ENST00000558958 FCARP24071 287 aa18.63■□□□□ 0.57
CLPX-203ENST00000558958 GBP2P32456 591 aaPredicted RBP18.63■□□□□ 0.57
CLPX-203ENST00000558958 IRAK1P51617 712 aa18.63■□□□□ 0.57
CLPX-203ENST00000558958 RABGAP1LQ5R372 815 aa18.63■□□□□ 0.57
CLPX-203ENST00000558958 NCBP2-AS2Q69YL0 99 aa18.63■□□□□ 0.57
CLPX-203ENST00000558958 CPXM2Q8N436 756 aa18.63■□□□□ 0.57
CLPX-203ENST00000558958 PRICKLE1Q96MT3 831 aaPredicted RBP18.63■□□□□ 0.57
CLPX-203ENST00000558958 CATSPERBQ9H7T0 1116 aa18.63■□□□□ 0.57
CLPX-203ENST00000558958 MPP6Q9NZW5 540 aa18.63■□□□□ 0.57
CLPX-203ENST00000558958 TBC1D14Q9P2M4 693 aa18.63■□□□□ 0.57
CLPX-203ENST00000558958 R3HDM2Q9Y2K5 976 aaKnown RBP18.63■□□□□ 0.57
CLPX-203ENST00000558958 MFHAS1Q9Y4C4 1052 aa18.63■□□□□ 0.57
CLPX-203ENST00000558958 DOCK8Q8NF50 2099 aa18.63■□□□□ 0.57
CLPX-203ENST00000558958 WASH4PA8MWX3 477 aa18.62■□□□□ 0.57
CLPX-203ENST00000558958 APOC4-APOC2K7ER74 178 aa18.62■□□□□ 0.57
CLPX-203ENST00000558958 TRDMT1O14717 391 aaKnown RBP18.62■□□□□ 0.57
CLPX-203ENST00000558958 CNTN5O94779 1100 aa18.62■□□□□ 0.57
CLPX-203ENST00000558958 APOC2P02655 101 aa18.62■□□□□ 0.57
CLPX-203ENST00000558958 RHOQP17081 205 aa18.62■□□□□ 0.57
CLPX-203ENST00000558958 TGM2P21980 687 aa18.62■□□□□ 0.57
CLPX-203ENST00000558958 CHKAP35790 457 aa18.62■□□□□ 0.57
CLPX-203ENST00000558958 SMAD4Q13485 552 aaKnown RBP18.62■□□□□ 0.57
CLPX-203ENST00000558958 PAFAH1B3Q15102 231 aaKnown RBP18.62■□□□□ 0.57
CLPX-203ENST00000558958 ALFQ53S48 1182 aa18.62■□□□□ 0.57
CLPX-203ENST00000558958 TMCO3Q6UWJ1 677 aa18.62■□□□□ 0.57
CLPX-203ENST00000558958 NLRP14Q86W24 1093 aa18.62■□□□□ 0.57
CLPX-203ENST00000558958 CEP112Q8N8E3 955 aa18.62■□□□□ 0.57
CLPX-203ENST00000558958 PRELID2Q8N945 189 aa18.62■□□□□ 0.57
CLPX-203ENST00000558958 MNS1Q8NEH6 495 aa18.62■□□□□ 0.57
CLPX-203ENST00000558958 SPATA4Q8NEY3 305 aa18.62■□□□□ 0.57
CLPX-203ENST00000558958 HLA-CQ95604 372 aa18.62■□□□□ 0.57
CLPX-203ENST00000558958 CARD6Q9BX69 1037 aa18.62■□□□□ 0.57
CLPX-203ENST00000558958 MBTPS2O43462 519 aa18.61■□□□□ 0.57
CLPX-203ENST00000558958 TSPAN3O60637 253 aa18.61■□□□□ 0.57
CLPX-203ENST00000558958 SGSHP51688 502 aa18.61■□□□□ 0.57
CLPX-203ENST00000558958 VCPP55072 806 aaKnown RBP18.61■□□□□ 0.57
CLPX-203ENST00000558958 RPS24P62847 133 aaKnown RBP18.61■□□□□ 0.57
CLPX-203ENST00000558958 TANGO2Q6ICL3 276 aa18.61■□□□□ 0.57
CLPX-203ENST00000558958 NPNTQ6UXI9 565 aa18.61■□□□□ 0.57
CLPX-203ENST00000558958 CFAP52Q8N1V2 620 aa18.61■□□□□ 0.57
CLPX-203ENST00000558958 RTL3Q8N8U3 475 aaKnown RBP18.61■□□□□ 0.57
CLPX-203ENST00000558958 TTC13Q8NBP0 860 aa18.61■□□□□ 0.57
CLPX-203ENST00000558958 BPIFB1Q8TDL5 484 aa18.61■□□□□ 0.57
CLPX-203ENST00000558958 E2F7Q96AV8 911 aa18.61■□□□□ 0.57
CLPX-203ENST00000558958 OTUB2Q96DC9 234 aa18.61■□□□□ 0.57
CLPX-203ENST00000558958 RETREG1Q9H6L5 497 aa18.61■□□□□ 0.57
CLPX-203ENST00000558958 ZFP14Q9HCL3 533 aa18.61■□□□□ 0.57
CLPX-203ENST00000558958 TMEM248Q9NWD8 314 aa18.61■□□□□ 0.57
CLPX-203ENST00000558958 EPS15L1Q9UBC2 864 aa18.61■□□□□ 0.57
CLPX-203ENST00000558958 SAE1Q9UBE0 346 aaPredicted RBP18.61■□□□□ 0.57
CLPX-203ENST00000558958 ZNF212Q9UDV6 495 aa18.61■□□□□ 0.57
CLPX-203ENST00000558958 GOLGA6L10A0A0M3HER8 536 aa18.6■□□□□ 0.57
CLPX-203ENST00000558958 HEPACAM2A8MVW5 462 aa18.6■□□□□ 0.57
CLPX-203ENST00000558958 SLC9A3R1O14745 358 aaPredicted RBP18.6■□□□□ 0.57
CLPX-203ENST00000558958 PECAM1P16284 738 aaPredicted RBP18.6■□□□□ 0.57
CLPX-203ENST00000558958 GBE1Q04446 702 aa18.6■□□□□ 0.57
CLPX-203ENST00000558958 CYP1B1Q16678 543 aa18.6■□□□□ 0.57
CLPX-203ENST00000558958 TTC39BQ5VTQ0 682 aaPredicted RBP18.6■□□□□ 0.57
CLPX-203ENST00000558958 C1orf228Q6PIY5 440 aa18.6■□□□□ 0.57
CLPX-203ENST00000558958 OTOP3Q7RTS5 596 aa18.6■□□□□ 0.57
CLPX-203ENST00000558958 CIR1Q86X95 450 aaPredicted RBP18.6■□□□□ 0.57
CLPX-203ENST00000558958 TDRD5Q8NAT2 981 aaKnown RBP18.6■□□□□ 0.57
CLPX-203ENST00000558958 P3H4Q92791 437 aa18.6■□□□□ 0.57
CLPX-203ENST00000558958 HAUS1Q96CS2 278 aa18.6■□□□□ 0.57
CLPX-203ENST00000558958 TMA16Q96EY4 203 aaKnown RBP18.6■□□□□ 0.57
CLPX-203ENST00000558958 KLC2Q9H0B6 622 aa18.6■□□□□ 0.57
CLPX-203ENST00000558958 LINC00597Q9H2U6 94 aa18.6■□□□□ 0.57
CLPX-203ENST00000558958 RBM12Q9NTZ6 932 aaKnown RBP18.6■□□□□ 0.57
CLPX-203ENST00000558958 HEY1Q9Y5J3 304 aa18.6■□□□□ 0.57
CLPX-203ENST00000558958 PRUNE2Q8WUY3 3088 aa18.6■□□□□ 0.57
CLPX-203ENST00000558958 CTAGE15A4D2H0 777 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 MFSD11O43934 449 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 CTAGE8P0CG41 777 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 NR2C2P49116 596 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 CDH4P55283 916 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 OTUD4Q01804 1114 aaKnown RBP18.59■□□□□ 0.57
CLPX-203ENST00000558958 SLC10A2Q12908 348 aaPredicted RBP18.59■□□□□ 0.57
CLPX-203ENST00000558958 CCNG2Q16589 344 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 CHST9Q7L1S5 443 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 TFAP2DQ7Z6R9 452 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 CTAGE6Q86UF2 777 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 CTAGE4Q8IX94 777 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 NPWQ8N729 165 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 C12orf50Q8NA57 414 aaPredicted RBP18.59■□□□□ 0.57
CLPX-203ENST00000558958 HJURPQ8NCD3 748 aaPredicted RBP18.59■□□□□ 0.57
CLPX-203ENST00000558958 ACTL9Q8TC94 416 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 C1orf54Q8WWF1 131 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 ATG4AQ8WYN0 398 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 P2RY11Q96G91 374 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 RPGRIP1Q96KN7 1286 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 FAM118BQ9BPY3 351 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms