RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 AHI1Q8N157 1196 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 CCAR2Q8N163 923 aaKnown RBP12.76□□□□□ -0.37
SMAD3-205ENST00000558428 FIBINQ8TAL6 211 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 KCNV2Q8TDN2 545 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 WFIKKN2Q8TEU8 576 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 UCMAQ8WVF2 138 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 IGSF8Q969P0 613 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 CCDC42Q96M95 316 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 HAPLN3Q96S86 360 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 CHP1Q99653 195 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 CNPY3Q9BT09 278 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 CIPCQ9C0C6 399 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 THAP2Q9H0W7 228 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 MRPL47Q9HD33 250 aaKnown RBP12.76□□□□□ -0.37
SMAD3-205ENST00000558428 FAM86C1Q9NVL1 165 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 GGA2Q9UJY4 613 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 HCN2Q9UL51 889 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 MMP17Q9ULZ9 603 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 TMEM191CA6NGB0 347 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 K7ESF4 209 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 SGK1O00141 431 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 TDGF1P13385 188 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 HOXC13P31276 330 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 CD70P32970 193 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 ADRA1BP35368 520 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 WASP42768 502 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 GALCP54803 685 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 NHLH1Q02575 133 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 LMAN2Q12907 356 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 EIF4HQ15056 248 aaKnown RBP12.75□□□□□ -0.37
SMAD3-205ENST00000558428 ASTE1Q2TB18 679 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-205ENST00000558428 EOGTQ5NDL2 527 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 TMEM215Q68D42 235 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 SCYL2Q6P3W7 929 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 LRRC31Q6UY01 552 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 CHST9Q7L1S5 443 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 CHPFQ8IZ52 775 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 CCDC185Q8N715 623 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMAD3-205ENST00000558428 TC2NQ8N9U0 490 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 C1orf74Q96LT6 269 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 HHIPQ96QV1 700 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 TRIM7Q9C029 511 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 NHEJ1Q9H9Q4 299 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-205ENST00000558428 ELOVL2Q9NXB9 296 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 NENFQ9UMX5 172 aa12.75□□□□□ -0.37
SMAD3-205ENST00000558428 E9PAM4 449 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 TIMM44O43615 452 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 SRGAP2O75044 1071 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 ADAM23O75077 832 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 HNRNPLP14866 589 aaKnown RBP eCLIP12.74□□□□□ -0.37
SMAD3-205ENST00000558428 POLR2EP19388 210 aaKnown RBP12.74□□□□□ -0.37
SMAD3-205ENST00000558428 NTSR1P30989 418 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 IRAK1P51617 712 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 NRLP54845 237 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 CDH4P55283 916 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 DMWDQ09019 674 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 ZNF252P-AS1Q0IIN9 211 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 CRY1Q16526 586 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 FUT11Q495W5 492 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 C5orf22Q49AR2 442 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 FSCBQ5H9T9 825 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 MBLAC2Q68D91 279 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 HEATR6Q6AI08 1181 aaKnown RBP12.74□□□□□ -0.37
SMAD3-205ENST00000558428 SDE2Q6IQ49 451 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 KIAA0907Q7Z7F0 614 aaPredicted RBP12.74□□□□□ -0.37
SMAD3-205ENST00000558428 SLFN11Q7Z7L1 901 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 ZNF683Q8IZ20 524 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 TSTD1Q8NFU3 115 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 FNIP1Q8TF40 1166 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 SORCS1Q8WY21 1168 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 NTAN1Q96AB6 310 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 ARHGEF26Q96DR7 871 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 LMLNQ96KR4 655 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 ACOX2Q99424 681 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 NUP85Q9BW27 656 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 FAM126AQ9BYI3 521 aaPredicted RBP12.74□□□□□ -0.37
SMAD3-205ENST00000558428 SPTLC3Q9NUV7 552 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 ZSCAN32Q9NX65 697 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 CACNA2D2Q9NY47 1150 aa12.74□□□□□ -0.37
SMAD3-205ENST00000558428 KIAA1522Q9P206 1035 aaPredicted RBP12.74□□□□□ -0.37
SMAD3-205ENST00000558428 THAP10Q9P2Z0 257 aaPredicted RBP12.74□□□□□ -0.37
SMAD3-205ENST00000558428 CKAP5Q14008 2032 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 EML5Q05BV3 1969 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.73□□□□□ -0.37
SMAD3-205ENST00000558428 NPC1O15118 1278 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 CLDN11O75508 207 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 RNF8O76064 485 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 CNTN5O94779 1100 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 MOCS3O95396 460 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 APBB3O95704 486 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 CYP1A2P05177 515 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 ATP5BP06576 529 aaKnown RBP12.73□□□□□ -0.37
SMAD3-205ENST00000558428 HOXB2P14652 356 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 HOXA6P31267 233 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 PXNP49023 591 aaPredicted RBP12.73□□□□□ -0.37
SMAD3-205ENST00000558428 FNTBP49356 437 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 DGKEP52429 567 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 ZNF177Q13360 481 aaPredicted RBP12.73□□□□□ -0.37
SMAD3-205ENST00000558428 ZNF234Q14588 700 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms