RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 PDE1CQ14123 709 aaPredicted RBP11.48□□□□□ -0.57
PCAT29-201ENST00000558411 SLC9B1Q4ZJI4 515 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 FAM47CQ5HY64 1035 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 NHSL2Q5HYW2 709 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 IL23RQ5VWK5 629 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 TDRD10Q5VZ19 366 aaKnown RBP11.48□□□□□ -0.57
PCAT29-201ENST00000558411 SPOPLQ6IQ16 392 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 ANKRD26P1Q6NSI1 321 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 PACRGLQ8N7B6 248 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 CNTD1Q8N815 330 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 MINDY2Q8NBR6 621 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 KCTD6Q8NC69 237 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 TFAP2CQ92754 450 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 ANKRD36BP1Q96IX9 119 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 TUBA1CQ9BQE3 449 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 NTPCRQ9BSD7 190 aaKnown RBP11.48□□□□□ -0.57
PCAT29-201ENST00000558411 C1orf50Q9BV19 199 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 SDCBP2Q9H190 292 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 EFCAB1Q9HAE3 211 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 MOCS1Q9NZB8 636 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 ARHGAP28Q9P2N2 729 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 CCPG1Q9ULG6 757 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 SPTLC1O15269 473 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 EXTL3O43909 919 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 NDUFB10O96000 172 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 CFBP00751 764 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 PRKCGP05129 697 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 PABPC1P11940 636 aaKnown RBP11.48□□□□□ -0.57
PCAT29-201ENST00000558411 MYF6P23409 242 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 JAK1P23458 1154 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 YWHABP31946 246 aaKnown RBP11.48□□□□□ -0.57
PCAT29-201ENST00000558411 SERPINB5P36952 375 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 PKNOX1P55347 436 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 RHDQ02161 417 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 NFIXQ14938 502 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 SMTNL2Q2TAL5 461 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 PPP4R4Q6NUP7 873 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 RSBN1LQ6PCB5 846 aaPredicted RBP11.48□□□□□ -0.57
PCAT29-201ENST00000558411 TRMT10BQ6PF06 316 aaKnown RBP11.48□□□□□ -0.57
PCAT29-201ENST00000558411 XKR5Q6UX68 686 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 TTC30AQ86WT1 665 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 SIAH1Q8IUQ4 282 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 MYO1HQ8N1T3 1032 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 ARFGAP1Q8N6T3 406 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 ANKFN1Q8N957 763 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 RCN3Q96D15 328 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 SIGLEC10Q96LC7 697 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 DHRS1Q96LJ7 313 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 MXRA8Q9BRK3 442 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 FAM213AQ9BRX8 229 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 GBA3Q9H227 469 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 ZNF385DQ9H6B1 395 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 APOBEC3GQ9HC16 384 aaKnown RBP11.48□□□□□ -0.57
PCAT29-201ENST00000558411 ANLNQ9NQW6 1124 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 RIC8BQ9NVN3 520 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 CTDP1Q9Y5B0 961 aaPredicted RBP11.48□□□□□ -0.57
PCAT29-201ENST00000558411 FER1L6Q2WGJ9 1857 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 SIPA1L1O43166 1804 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 CNTNAP2Q9UHC6 1331 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 A0A1W2PPW3 197 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 TPP1O14773 563 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 PFDN6O15212 129 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 NOL3O60936 208 aaKnown RBP11.47□□□□□ -0.57
PCAT29-201ENST00000558411 GCATO75600 419 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 ALDH1A2O94788 518 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 VNN1O95497 513 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 HSPA4LO95757 839 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 ALDOAP04075 364 aaKnown RBP11.47□□□□□ -0.57
PCAT29-201ENST00000558411 ERBB2P04626 1255 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 P4HA1P13674 534 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 SLC10A2Q12908 348 aaPredicted RBP11.47□□□□□ -0.57
PCAT29-201ENST00000558411 TRAP1Q12931 704 aaKnown RBP11.47□□□□□ -0.57
PCAT29-201ENST00000558411 PPIL2Q13356 520 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 ART3Q13508 389 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 TFDP2Q14188 446 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 AARS2Q5JTZ9 985 aaKnown RBP11.47□□□□□ -0.57
PCAT29-201ENST00000558411 FAM102BQ5T8I3 360 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 TTC33Q6PID6 262 aaPredicted RBP11.47□□□□□ -0.57
PCAT29-201ENST00000558411 ARMCX6Q7L4S7 300 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 SAMD3Q8N6K7 520 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 MFSD2AQ8NA29 543 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 FAM47BQ8NA70 645 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 SREK1Q8WXA9 508 aaKnown RBP11.47□□□□□ -0.57
PCAT29-201ENST00000558411 ATP6V1E2Q96A05 226 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 ZNF641Q96N77 438 aaPredicted RBP11.47□□□□□ -0.57
PCAT29-201ENST00000558411 ZMAT2Q96NC0 199 aaKnown RBP11.47□□□□□ -0.57
PCAT29-201ENST00000558411 GPR101Q96P66 508 aaPredicted RBP11.47□□□□□ -0.57
PCAT29-201ENST00000558411 EFHD1Q9BUP0 239 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 TPK1Q9H3S4 243 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 KMT5AQ9NQR1 393 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 DUS2Q9NX74 493 aaKnown RBP11.47□□□□□ -0.57
PCAT29-201ENST00000558411 PSME4Q14997 1843 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 KRBA1A5PL33 1030 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 AKAP10O43572 662 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 FOXD2O60548 495 aaPredicted RBP11.47□□□□□ -0.57
PCAT29-201ENST00000558411 UFL1O94874 794 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 TAL1P17542 331 aaPredicted RBP11.47□□□□□ -0.57
PCAT29-201ENST00000558411 SLC7A1P30825 629 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 DPP6P42658 865 aa11.47□□□□□ -0.57
PCAT29-201ENST00000558411 NRLP54845 237 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms