RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 PIP4P1Q86T03 277 aa3.8□□□□□ -1.8
SPG11-206ENST00000558093 ADGRF3Q8IZF5 1079 aa3.8□□□□□ -1.8
SPG11-206ENST00000558093 OR4N4Q8N0Y3 316 aa3.8□□□□□ -1.8
SPG11-206ENST00000558093 MMP21Q8N119 569 aa3.8□□□□□ -1.8
SPG11-206ENST00000558093 ATG16L2Q8NAA4 619 aa3.8□□□□□ -1.8
SPG11-206ENST00000558093 NSMCE1Q8WV22 266 aa3.8□□□□□ -1.8
SPG11-206ENST00000558093 PIMREGQ9BSJ6 248 aa3.8□□□□□ -1.8
SPG11-206ENST00000558093 RTKNQ9BST9 563 aa3.8□□□□□ -1.8
SPG11-206ENST00000558093 WDR12Q9GZL7 423 aaKnown RBP3.8□□□□□ -1.8
SPG11-206ENST00000558093 THSD1Q9NS62 852 aa3.8□□□□□ -1.8
SPG11-206ENST00000558093 MSRB1Q9NZV6 116 aa3.8□□□□□ -1.8
SPG11-206ENST00000558093 ANAPC4Q9UJX5 808 aa3.8□□□□□ -1.8
SPG11-206ENST00000558093 UTS2RQ9UKP6 389 aa3.8□□□□□ -1.8
SPG11-206ENST00000558093 AGO2Q9UKV8 859 aaKnown RBP3.8□□□□□ -1.8
SPG11-206ENST00000558093 ZBTB1Q9Y2K1 713 aa3.8□□□□□ -1.8
SPG11-206ENST00000558093 DAAM1Q9Y4D1 1078 aa3.8□□□□□ -1.8
SPG11-206ENST00000558093 IGLV5-39A0A0G2JS06 123 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 B4DGG1 531 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 SYT5O00445 386 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 TRIM38O00635 465 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 ACTL6BO94805 426 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 GYS1P13807 737 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 HTR3AP46098 478 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 FAM3BP58499 235 aaPredicted RBP3.79□□□□□ -1.8
SPG11-206ENST00000558093 RBM6P78332 1123 aaKnown RBP3.79□□□□□ -1.8
SPG11-206ENST00000558093 PTK2BQ14289 1009 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 GALNT3Q14435 633 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 TWIST1Q15672 202 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 INPP5JQ15735 1006 aaPredicted RBP3.79□□□□□ -1.8
SPG11-206ENST00000558093 PFKFB4Q16877 469 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 SMTNL2Q2TAL5 461 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 PRTGQ2VWP7 1150 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 ARL13AQ5H913 290 aaPredicted RBP3.79□□□□□ -1.8
SPG11-206ENST00000558093 C6orf10Q5SRN2 563 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 ISM2Q6H9L7 571 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 RAB11FIP2Q7L804 512 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 TRAPPC11Q7Z392 1133 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 DDIASQ8IXT1 998 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 TMEM199Q8N511 208 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 OR52N4Q8NGI2 321 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 WIPF2Q8TF74 440 aaPredicted RBP3.79□□□□□ -1.8
SPG11-206ENST00000558093 IGFBPL1Q8WX77 278 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 SLC25A28Q96A46 364 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 ZNF347Q96SE7 839 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 MECRQ9BV79 373 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 KATNAL1Q9BW62 490 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 SORBS1Q9BX66 1292 aaKnown RBP3.79□□□□□ -1.8
SPG11-206ENST00000558093 FAM234AQ9H0X4 552 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 ELAC1Q9H777 363 aaKnown RBP3.79□□□□□ -1.8
SPG11-206ENST00000558093 PLCB1Q9NQ66 1216 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 LIN7CQ9NUP9 197 aaKnown RBP3.79□□□□□ -1.8
SPG11-206ENST00000558093 CNTN6Q9UQ52 1028 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 TNFSF13BQ9Y275 285 aa3.79□□□□□ -1.8
SPG11-206ENST00000558093 TRBV5-3A0A0A0MS03 114 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 KIR2DS5A0A0G2JLQ3 304 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 FAM90A10PA6NDY2 464 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 MBD3L5A6NJ08 208 aaPredicted RBP3.78□□□□□ -1.8
SPG11-206ENST00000558093 SLC38A8A6NNN8 435 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 EFCAB8A8MWE9 144 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 KIR2DS3K7RE56 304 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 MSI1O43347 362 aaKnown RBP3.78□□□□□ -1.8
SPG11-206ENST00000558093 NDUFB8O95169 186 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 CRYABP02511 175 aaKnown RBP3.78□□□□□ -1.8
SPG11-206ENST00000558093 SNHG28P0DPA3 235 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 PDIA3P30101 505 aaKnown RBP3.78□□□□□ -1.8
SPG11-206ENST00000558093 PCP4P48539 62 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 POLE2P56282 527 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 PPATQ06203 517 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 KRTAP1-1Q07627 177 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 FHL1Q13642 323 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 BLMHQ13867 455 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 C10orf76Q5T2E6 689 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 DAB2IPQ5VWQ8 1189 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 RFX8Q6ZV50 586 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 CCDC117Q8IWD4 279 aaPredicted RBP3.78□□□□□ -1.8
SPG11-206ENST00000558093 PAQR4Q8N4S7 273 aaPredicted RBP3.78□□□□□ -1.8
SPG11-206ENST00000558093 POF1BQ8WVV4 589 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 CPT1BQ92523 772 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 CENPIQ92674 756 aaPredicted RBP3.78□□□□□ -1.8
SPG11-206ENST00000558093 EME1Q96AY2 570 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 C3orf49Q96BT1 292 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 ZNF419Q96HQ0 510 aaPredicted RBP3.78□□□□□ -1.8
SPG11-206ENST00000558093 NAF1Q96HR8 494 aaKnown RBP3.78□□□□□ -1.8
SPG11-206ENST00000558093 CLMNQ96JQ2 1002 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 ADAD1Q96M93 576 aaKnown RBP3.78□□□□□ -1.8
SPG11-206ENST00000558093 RMDN3Q96TC7 470 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 SEMA4BQ9NPR2 832 aaPredicted RBP3.78□□□□□ -1.8
SPG11-206ENST00000558093 DACT1Q9NYF0 836 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 HERC5Q9UII4 1024 aaKnown RBP3.78□□□□□ -1.8
SPG11-206ENST00000558093 SLC25A13Q9UJS0 675 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 LAMP3Q9UQV4 416 aa3.78□□□□□ -1.8
SPG11-206ENST00000558093 COPG1Q9Y678 874 aaKnown RBP3.78□□□□□ -1.8
SPG11-206ENST00000558093 TMEM272A0A1B0GTI8 110 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 A0A1W2PPC1 479 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 CXorf65A6NEN9 183 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 AGAP5A6NIR3 686 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 CD8B2A6NJW9 211 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 ACKR2O00590 384 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 TLX3O43711 291 aaPredicted RBP3.77□□□□□ -1.81
SPG11-206ENST00000558093 OAZ2O95190 189 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms