RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 CDK17Q00537 523 aa16.77■□□□□ 0.28
AC027088.1-201ENST00000557966 CDH18Q13634 790 aa16.77■□□□□ 0.28
AC027088.1-201ENST00000557966 UAP1L1Q3KQV9 507 aa16.77■□□□□ 0.28
AC027088.1-201ENST00000557966 PITRM1Q5JRX3 1037 aa16.77■□□□□ 0.28
AC027088.1-201ENST00000557966 CDKAL1Q5VV42 579 aa16.77■□□□□ 0.28
AC027088.1-201ENST00000557966 SLC26A9Q7LBE3 791 aa16.77■□□□□ 0.28
AC027088.1-201ENST00000557966 RGL4Q8IZJ4 473 aa16.77■□□□□ 0.28
AC027088.1-201ENST00000557966 ATP6V0D2Q8N8Y2 350 aa16.77■□□□□ 0.28
AC027088.1-201ENST00000557966 CEP76Q8TAP6 659 aa16.77■□□□□ 0.28
AC027088.1-201ENST00000557966 NOX5Q96PH1 765 aa16.77■□□□□ 0.28
AC027088.1-201ENST00000557966 GANQ9H2C0 597 aa16.77■□□□□ 0.28
AC027088.1-201ENST00000557966 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.77■□□□□ 0.28
AC027088.1-201ENST00000557966 ACADMP11310 421 aa16.76■□□□□ 0.27
AC027088.1-201ENST00000557966 GGCXP38435 758 aa16.76■□□□□ 0.27
AC027088.1-201ENST00000557966 NUMBP49757 651 aa16.76■□□□□ 0.27
AC027088.1-201ENST00000557966 NOVA1P51513 510 aaKnown RBP16.76■□□□□ 0.27
AC027088.1-201ENST00000557966 RPS14P62263 151 aaKnown RBP16.76■□□□□ 0.27
AC027088.1-201ENST00000557966 SLC6A3Q01959 620 aa16.76■□□□□ 0.27
AC027088.1-201ENST00000557966 TAF3Q5VWG9 929 aa16.76■□□□□ 0.27
AC027088.1-201ENST00000557966 NOP9Q86U38 636 aaKnown RBP16.76■□□□□ 0.27
AC027088.1-201ENST00000557966 FAM124AQ86V42 546 aa16.76■□□□□ 0.27
AC027088.1-201ENST00000557966 APCDD1Q8J025 514 aa16.76■□□□□ 0.27
AC027088.1-201ENST00000557966 ZNF397Q8NF99 534 aaPredicted RBP16.76■□□□□ 0.27
AC027088.1-201ENST00000557966 OR2I1PQ8NGU4 316 aa16.76■□□□□ 0.27
AC027088.1-201ENST00000557966 FOXJ1Q92949 421 aa16.76■□□□□ 0.27
AC027088.1-201ENST00000557966 CNTNAP3BQ96NU0 1288 aa16.76■□□□□ 0.27
AC027088.1-201ENST00000557966 CNTNAP3Q9BZ76 1288 aa16.76■□□□□ 0.27
AC027088.1-201ENST00000557966 ADAMTS9Q9P2N4 1935 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 MEI4A8MW99 385 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 F5H5T6 163 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 F8VZ95 297 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 H0Y626 953 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 ASLP04424 464 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 TFE3P19532 575 aaPredicted RBP16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 PMLP29590 882 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 OXTRP30559 389 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 CCR1P32246 355 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 IRAK1P51617 712 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 BPIFB4P59827 614 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 CENPCQ03188 943 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 NME3Q13232 169 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 KRT31Q15323 416 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 PLEKHG6Q3KR16 790 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 SH3PXD2AQ5TCZ1 1133 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 DCAF12L1Q5VU92 463 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 CADM4Q8NFZ8 388 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 EPS8L1Q8TE68 723 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 DNASE2BQ8WZ79 361 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 GBP4Q96PP9 640 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 GTPBP2Q9BX10 602 aaKnown RBP16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 VPS16Q9H269 839 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 SYNCQ9H7C4 482 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 CEP83Q9Y592 693 aa16.75■□□□□ 0.27
AC027088.1-201ENST00000557966 METTL12A8MUP2 240 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 I6L893 689 aaPredicted RBP16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 ARHGAP33O14559 1287 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 EPHB6O15197 1021 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 SIN3BO75182 1162 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 ATXN8OSP0DMR3 200 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 ABCB4P21439 1286 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 ACSL1P33121 698 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 NOS2P35228 1153 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 GFPT1Q06210 699 aaPredicted RBP16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 HNRNPA1L2Q32P51 320 aaKnown RBP16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 C2CD6Q53TS8 623 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 WDR45BQ5MNZ6 344 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 SYCP2LQ5T4T6 812 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 FBXL22Q6P050 247 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 RABEPKQ7Z6M1 372 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 DHX40Q8IX18 779 aaKnown RBP16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 CCAR2Q8N163 923 aaKnown RBP16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 ZCCHC9Q8N567 271 aaKnown RBP16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 MINDY1Q8N5J2 469 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 TMEM35BQ8NCS4 154 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 DEFB124Q8NES8 71 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 IGSF8Q969P0 613 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 NPY6RQ99463 290 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 NUP58Q9BVL2 599 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 STK33Q9BYT3 514 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 PDCL3Q9H2J4 239 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 C6orf106Q9H6K1 298 aaPredicted RBP16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 FBRSQ9HAH7 460 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 ANLNQ9NQW6 1124 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 KIAA1522Q9P206 1035 aaPredicted RBP16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 ERVW-1Q9UQF0 538 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 HS3ST4Q9Y661 456 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 SLCO1B1Q9Y6L6 691 aa16.74■□□□□ 0.27
AC027088.1-201ENST00000557966 ITIH6Q6UXX5 1313 aa16.73■□□□□ 0.27
AC027088.1-201ENST00000557966 A0A1B0GVM2 712 aa16.73■□□□□ 0.27
AC027088.1-201ENST00000557966 TCAF2A6NFQ2 919 aa16.73■□□□□ 0.27
AC027088.1-201ENST00000557966 TTC34A8MYJ7 566 aa16.73■□□□□ 0.27
AC027088.1-201ENST00000557966 M0QYT0 321 aa16.73■□□□□ 0.27
AC027088.1-201ENST00000557966 MMEP08473 750 aa16.73■□□□□ 0.27
AC027088.1-201ENST00000557966 SLC2A3P11169 496 aa16.73■□□□□ 0.27
AC027088.1-201ENST00000557966 PDGFRAP16234 1089 aa16.73■□□□□ 0.27
AC027088.1-201ENST00000557966 CSRP1P21291 193 aaKnown RBP16.73■□□□□ 0.27
AC027088.1-201ENST00000557966 MZF1P28698 734 aaPredicted RBP16.73■□□□□ 0.27
AC027088.1-201ENST00000557966 MATKP42679 507 aa16.73■□□□□ 0.27
AC027088.1-201ENST00000557966 GABRB2P47870 512 aa16.73■□□□□ 0.27
AC027088.1-201ENST00000557966 STK19P49842 368 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms