RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CCDC134Q9H6E4 229 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 FLRT1Q9NZU1 646 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 OSGIN2Q9Y236 505 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 DNAJC16Q9Y2G8 782 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 DMRT1Q9Y5R6 373 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 C17orf100A8MU93 164 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 HLA-DQA2P01906 255 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 CHRM2P08172 466 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 ARSAP15289 507 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 MAN1A1P33908 653 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 GALNSP34059 522 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 IDUAP35475 653 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 STAT1P42224 750 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 TFF2Q03403 129 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 TRPC3Q13507 836 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 CUL4BQ13620 913 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 GPR162Q16538 588 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 EARS2Q5JPH6 523 aaKnown RBP1.91□□□□□ -2.1
HIF1A-212ENST00000557538 OLFML1Q6UWY5 402 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 C1orf122Q6ZSJ8 110 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 C2CD5Q86YS7 1000 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 VRK3Q8IV63 474 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 TFAP2BQ92481 460 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 RITA1Q96K30 269 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 ELOVL1Q9BW60 279 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 IL21RQ9HBE5 538 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 TBC1D14Q9P2M4 693 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 ASAP1Q9ULH1 1129 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 CYP46A1Q9Y6A2 500 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 RUSC2Q8N2Y8 1516 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 HMGB1P1B2RPK0 211 aaPredicted RBP1.91□□□□□ -2.1
HIF1A-212ENST00000557538 PDHA1P08559 390 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 HOXB5P09067 269 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 GPD1P21695 349 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 PRPH2P23942 346 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 OAZ1P54368 228 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 WDR5P61964 334 aaKnown RBP1.91□□□□□ -2.1
HIF1A-212ENST00000557538 SSBP2P81877 361 aaPredicted RBP1.91□□□□□ -2.1
HIF1A-212ENST00000557538 SLC20A2Q08357 652 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 MTA1Q13330 715 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 CAMK1Q14012 370 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 SHBQ15464 509 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 GLIPR1L2Q4G1C9 344 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 ISM2Q6H9L7 571 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 GJB7Q6PEY0 223 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 NEK8Q86SG6 692 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 NCSTNQ92542 709 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 MPP4Q96JB8 637 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 CCDC17Q96LX7 622 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 TLK1Q9UKI8 766 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 WNT6Q9Y6F9 365 aa1.91□□□□□ -2.1
HIF1A-212ENST00000557538 WDR33Q9C0J8 1336 aaKnown RBP1.91□□□□□ -2.1
HIF1A-212ENST00000557538 A0A087X0M5 115 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 A0A1B0GX30 115 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 GAGE12JA6NER3 117 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 RRN3P2A6NIE6 340 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 LINC01548A6NM66 108 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 CES2O00748 559 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 USP1O94782 785 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 KAT7O95251 611 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 F9P00740 461 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 TUBB4AP04350 444 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 C6P13671 934 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 ACP5P13686 325 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 RPS6KB1P23443 525 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 BUD31P41223 144 aaPredicted RBP1.9□□□□□ -2.1
HIF1A-212ENST00000557538 CASP2P42575 452 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 MTNR1AP48039 350 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 CENPAP49450 140 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 TGFB2P61812 414 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 ZXDAP98168 799 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 CFHR1Q03591 330 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 SLC10A2Q12908 348 aaPredicted RBP1.9□□□□□ -2.1
HIF1A-212ENST00000557538 PKP1Q13835 747 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 RALBP1Q15311 655 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 KRBA2Q6ZNG9 492 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 SLC29A4Q7RTT9 530 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP1.9□□□□□ -2.1
HIF1A-212ENST00000557538 MAFAQ8NHW3 353 aaPredicted RBP1.9□□□□□ -2.1
HIF1A-212ENST00000557538 TMEM163Q8TC26 289 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 PIGOQ8TEQ8 1089 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 HMGB4Q8WW32 186 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 CAVIN3Q969G5 261 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 TRIM63Q969Q1 353 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 MMS19Q96T76 1030 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 ADGRE3Q9BY15 652 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 WDR26Q9H7D7 661 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 RNF146Q9NTX7 359 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 SLC12A4Q9UP95 1085 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 PASKQ96RG2 1323 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 MYO15BQ96JP2 1530 aa1.9□□□□□ -2.1
HIF1A-212ENST00000557538 MST1RQ04912 1400 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 CYP2D7A0A087X1C5 515 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 C16orf96A6NNT2 1141 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TEX22C9J3V5 150 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 SPTLC2O15270 562 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 VNN1O95497 513 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 PRKCGP05129 697 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TFEBP19484 476 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 PTMSP20962 102 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms