RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 NEU3Q9UQ49 428 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 LZTS1Q9Y250 596 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 INSL5Q9Y5Q6 135 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 BRCA2P51587 3418 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 GOLGA6CA6NDK9 693 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 HMGB1P1B2RPK0 211 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-233ENST00000557529 RNF103O00237 685 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 ALOX15BO15296 676 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 TLL1O43897 1013 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 ADH1AP07327 375 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 ABHD2P08910 425 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 GOLGA6DP0CG33 693 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 VAV1P15498 845 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 TPSB2P20231 275 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 GARSP41250 739 aaKnown RBP12.83□□□□□ -0.36
SHMT2-233ENST00000557529 NRLP54845 237 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 TWF1Q12792 350 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 PDIA2Q13087 525 aaKnown RBP12.83□□□□□ -0.36
SHMT2-233ENST00000557529 TPSAB1Q15661 275 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 KYNUQ16719 465 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 KRT71Q3SY84 523 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 ANKRD20A2Q5SQ80 823 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 ANKRD20A1Q5TYW2 823 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 AGBL2Q5U5Z8 902 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 PIK3R6Q5UE93 754 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 ANKRD20A3Q5VUR7 823 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 ANKRD22Q5VYY1 191 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 LRRC49Q8IUZ0 686 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 TAB3Q8N5C8 712 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-233ENST00000557529 RTL3Q8N8U3 475 aaKnown RBP12.83□□□□□ -0.36
SHMT2-233ENST00000557529 MCUQ8NE86 351 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 OR2W6PQ8NHA6 318 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 ZBTB9Q96C00 473 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 ATP6V1G3Q96LB4 118 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 PWWP2AQ96N64 755 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 VAT1Q99536 393 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 LBHD1Q9BQE6 289 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-233ENST00000557529 CCDC77Q9BR77 488 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 ROPN1BQ9BZX4 212 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-233ENST00000557529 ROPN1Q9HAT0 212 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-233ENST00000557529 ETNK1Q9HBU6 452 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 DNAJC17Q9NVM6 304 aaKnown RBP12.83□□□□□ -0.36
SHMT2-233ENST00000557529 GOLGA6AQ9NYA3 693 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 VPS18Q9P253 973 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 ASB3Q9Y575 518 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 CLUHO75153 1309 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 PTPRSQ13332 1948 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 GREB1Q4ZG55 1949 aa12.83□□□□□ -0.36
SHMT2-233ENST00000557529 E7ESA3 106 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 E7EVH7 732 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 GOLGA8MH3BSY2 632 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 TMEM63AO94886 807 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 ACSL3O95573 720 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 CXCL14O95715 111 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 IVLP07476 585 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 CNPP09543 421 aaKnown RBP12.82□□□□□ -0.36
SHMT2-233ENST00000557529 TSHRP16473 764 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 RHOQP17081 205 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 CA8P35219 290 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 BMPR1AP36894 532 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 CDK16Q00536 496 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 SEMA5AQ13591 1074 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 PARP6Q2NL67 630 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 MS4A13Q5J8X5 152 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 CCDC149Q6ZUS6 474 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 TMC7Q7Z402 723 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 DNAJB7Q7Z6W7 309 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-233ENST00000557529 CCDC33Q8N5R6 958 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 LRRN4Q8WUT4 740 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 PSMG2Q969U7 264 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 ARL8AQ96BM9 186 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 PLD4Q96BZ4 506 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 EMILIN2Q9BXX0 1053 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 ZYG11BQ9C0D3 744 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 SEPT10Q9P0V9 454 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 TRHDEQ9UKU6 1024 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 IRAK3Q9Y616 596 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 ZNF638Q14966 1978 aaKnown RBP12.82□□□□□ -0.36
SHMT2-233ENST00000557529 KIAA1671Q9BY89 1806 aa12.82□□□□□ -0.36
SHMT2-233ENST00000557529 IGLV3-10A0A075B6K4 115 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 A0A087WUV0 522 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-233ENST00000557529 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-233ENST00000557529 TCRBV7S3A2A0A539 114 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 TCEA3O75764 348 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 METTL18O95568 372 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 SHBGP04278 402 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 APRTP07741 180 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 CTNNB1P35222 781 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 SARNPP82979 210 aaKnown RBP12.81□□□□□ -0.36
SHMT2-233ENST00000557529 UBE3AQ05086 875 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 WASHC5Q12768 1159 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 AUHQ13825 339 aaKnown RBP12.81□□□□□ -0.36
SHMT2-233ENST00000557529 STAT4Q14765 748 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 PABPC1LQ4VXU2 614 aaKnown RBP12.81□□□□□ -0.36
SHMT2-233ENST00000557529 TTMPQ5BVD1 217 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 DNAJC21Q5F1R6 531 aaKnown RBP12.81□□□□□ -0.36
SHMT2-233ENST00000557529 ARTNQ5T4W7 220 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 C6orf118Q5T5N4 469 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 ITPRIPL1Q6GPH6 555 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 C14orf80Q86SX3 495 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms